Search results:
General Information
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 21531130 | 2011 | Cell line : - Source : Japanees patients Sample Type : CRC tumor and normal tissue No. of Sample : 113 Stage : TNM Stage I-IV | Peptide Nucleic Acid (PNA)-clamp real-timeRT-PCR TaqMan assay, Gene expression profiles. | Up-regulation | - | 113 (55 male nad 23 female with average age 65 year)patients who underwent a surgical resection of the primary CRC were included in this study. |
Gene Details
| Gene Type | protein coding |
|---|---|
| Gene Family | Tetratricopeptide (TTC) repeat domain containing |
| Description | This gene encodes a protein that contains three tetratricopeptide repeats. The gene has been shown to be hormonally regulated in breast cancer cells and may play a role in cancer cell invasion and metastasis. [provided by RefSeq, Mar 2009] | Chromosome | 14 |
| Location | 14q24.2 |
| Start | 70641787 |
| End | 70675360 |
| Strand | - |
| Gene Sequence | Download Select all |
| Length | 33574 |
| OMIM ID | 610488 |
| HGNC ID | HGNC:20267 |
| Unigene ID | Hs.79170 |
| Ensembl ID | ENSG00000133985 |
| PharmGKB ID | - |
mRNA Information
| mRNA ID | NM_015351.1 |
|---|---|
| Exon | join(1..749,25778..25960,29290..33574) | mRNA Sequence | Download Select all |
| Length | 5217 |
CDS Information
| Location | join(344..749,25778..25960,29290..29369) |
|---|---|
| CDS Sequence | Download Select all |
| CCDS ID | CCDS45132.1 |
Protein Information
| Protein ID | NP_056166.1 |
|---|---|
| Protein Name | Tetratricopeptide repeat domain 9 |
| Molecular Wt. (Da) | 24248 |
| Protein Sequence | Download Select all |
| Length | 222 |
| Uniprot ID | O43909 |
| Ensembl Protein ID | ENSP00000220562 |
Post-translational Modification Information (Source : HPRD)
No matching records could be found.
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING) View
No matching records from HPRD source could be found.
Pathway Information
No matching records could be found.
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| pfam00515 | 165-197 | TPR_1 |
| cl22897 | 165-197 | TPR_1 superfamily |
| smart00028 | 164-197 | TPR |
| pfam07719 | 164-197 | TPR_2 |
| TIGR02917 | 117-213 | PEP_TPR_lipo |
| pfam13424 | 129-190 | TPR_12 |
Ontology Information
| HPRD ID | 613 |
|---|---|
| Molecular Class | Unclassified |
| Molecular Function | Transporter activity (GO:0005215) |
| Biological Process | Transport (GO:0006810) |
Drug Information
No matching records could be found.