Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| UHRF1 | 29128 | Ubiquitin-like, containing PHD and RING finger domains, 1  | 19 | Np95; hNP95; ICBP90; RNF106; hUHRF1  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 22219067    | 2012 | Cell line : - Source : - Sample Type : CRC tumor and normal tissue No. of Sample : 144 Stage : - | real time RT-PCR,Iimmunohistochemistry with tissue microarrays | Up-regulation | - | UHRF1 promotes CRC growth and metastasis, likely by repressing p16(ink4a), and thus it may be used as a biomarker or even a therapeutic target for CRC. UHRF1 expression is upregulated in CRC and is associated with the progression of CRC. |
| 22286757    | 2012 | Cell line : - Source : - Sample Type : - No. of Sample : - Stage : - | - | Up-regulation | - | UHRF1 negatively regulates PPARG and is associated with a higher proliferative, clonogenic and migration potential. UHRF1 overexpression, as well as PPARG-silencing, imparts higher growth rate and phenotypic features resembling those occurring in the epithelial-mesenchymal transition. UHRF1 regulates PPARG silencing and both genes appear to be part of a complex regulatory network. 110 sporadic CRC patient sample were included. |
| 23023523    | 2012 | Cell line : - Source : - Sample Type : - No. of Sample : - Stage : - | Immunohistochemical staining, | Up-regulation | - | UHRF1 expression was upregulated in colorectal cancer and binds to methylated promoters of a number of tumor suppressor genes, including p16INK4A and p14ARF, by forming complexes with DNA methyltransferases and HDAC1, resulting in the induction of carcinogenesis. UHRF1 staining was detected in the nucleus of cancer cells, while it was not detected in colonic normal mucosa. UHRF1 may be involved in cellular proliferation and molecular pathogenesis of colorectal cancer in the right hemicolon. 231 colorectal cancer and 40 adenoma specimens were included. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | RING-type (C3HC4) zinc fingers |
| Description | This gene encodes a member of a subfamily of RING-finger type E3 ubiquitin ligases. The protein binds to specific DNA sequences, and recruits a histone deacetylase to regulate gene expression. Its expression peaks at late G1 phase and continues during G2 and M phases of the cell cycle. It plays a major role in the G1/S transition by regulating topoisomerase IIalpha and retinoblastoma gene expression, and functions in the p53-dependent DNA damage checkpoint. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]   | Chromosome | 19 |
| Location | 19p13.3 |
| Start | 4903080   |
| End | 4962154   |
| Strand | +   |
| Gene Sequence |    Download   Select all |
| Length | 59075   |
| OMIM ID | 607990    |
| HGNC ID | HGNC:12556    |
| Unigene ID | Hs.108106     |
| Ensembl ID | ENSG00000034063    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | XM_011528182.1 |
|---|---|
| Exon | complement(12259..13741)   | mRNA Sequence |    Download   Select all |
| Length | 4339   |
CDS Information
| Location | join(7768..7959,26143..26397,27637..27797,29662..29877, 38449..38549,38666..38852,41053..41176,41264..41371, 42782..42886,44026..44132,47532..47694,47780..47917, 51271..51409,51571..51743,53630..53734,57578..57724) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS74262.1 |    
Protein Information
| Protein ID | NP_037414.3 |
|---|---|
| Protein Name | Ubiquitin-like, containing PHD and RING finger domains, 1 |
| Molecular Wt. (Da) | 90970 |
| Protein Sequence |    Download   Select all |
| Length | 806   |
| Uniprot ID | P49327 |    
| Ensembl Protein ID | ENSP00000304592   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| S | Phosphorylation | 300;- |
| S | Phosphorylation | 287;- |
| S | Phosphorylation | 652;- |
| S | Phosphorylation | 639;- |
| S | Phosphorylation | 184;- |
| S | Phosphorylation | 171;- |
| T | Phosphorylation | 106;- |
| S | Phosphorylation | 108;- |
| T | Phosphorylation | 93;- |
| S | Phosphorylation | 95;- |
| S | Phosphorylation | 101;- |
| S | Phosphorylation | 88;- |
| T | Phosphorylation | 122;- |
| T | Phosphorylation | 109;- |
| S | Phosphorylation | 89 |
| S | Phosphorylation | 76 |
| S | Phosphorylation | 104 |
| S | Phosphorylation | 91 |
| S | Phosphorylation | 720 |
| S | Phosphorylation | 707 |
| K | Acetylation | 412 |
| K | Acetylation | 399 |
| K | Acetylation | 559 |
| K | Acetylation | 546 |
| S | Phosphorylation | 674 |
| S | Phosphorylation | 661 |
| S | Phosphorylation | 31 |
| S | Phosphorylation | 18 |
| T | Phosphorylation | 441 |
| T | Phosphorylation | 428 |
Enzyme Information
No matching records could be found.
PPi Information
No STRING Network could be found.
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 8350 |    HIST1H3A |    4155 |    NP_003520.1 |    in vitro;in vivo |    14993289    |
Pathway Information
No matching records could be found.
Structure Information
| PDB ID | 2FAZ |
|---|---|
| Resolution | 2 |
| Method | X-RAY DIFFRACTION |
| Chains | A,B   |
| Molecule | Ubiquitin-like containing PHD and RING finger domains protein 1   |
| Model | View |
Domain Information
| ID | Location | Description |
|---|---|---|
| cd01797 | Jan-78  | NIRF_N |
| cl00155 | Jan-78  | UBQ superfamily |
| cd15616 | 317-363  | PHD_UHRF1 |
| cl22851 | 317-363  | PHD_SF superfamily |
| cd00162 | 724-766  | RING |
| cl17238 | 724-766  | RING superfamily |
| pfam02182 | 416-586  | SAD_SRA |
| cl02620 | 416-586  | SAD_SRA superfamily |
| smart00466 | 414-586  | SRA |
| pfam12148 | 140-236  | DUF3590 |
| cl13567 | 140-236  | DUF3590 superfamily |
| cd15525 | 317-363  | PHD_UHRF1_2 |
| cd15617 | 317-363  | PHD_UHRF2 |
| cd15543 | 317-363  | PHD_RSF1 |
| cd01769 | Apr-74  | UBL |
| cd15627 | 318-363  | PHD_BAZ1A |
| pfam00240 | Jun-76  | ubiquitin |
| cd15519 | 318-363  | PHD1_Lid2p_like |
| cd15544 | 317-363  | PHD_BAZ1A_like |
| cd15536 | 318-363  | PHD_PHRF1 |
| pfam00628 | 318-366  | PHD |
| cd15515 | 317-363  | PHD1_KDM5A_like |
| smart00249 | 318-363  | PHD |
| cd15513 | 318-363  | PHD5_KMT2C_like |
| cd15527 | 317-363  | PHD2_KAT6A_6B |
| cd15605 | 318-363  | PHD1_Lid_like |
| cd15628 | 318-363  | PHD_BAZ1B |
| cd15545 | 318-363  | PHD_BAZ2A_like |
| cd15603 | 317-363  | PHD1_KDM5B |
| cd01803 | Jan-74  | Ubiquitin |
| cd15489 | 318-363  | PHD_SF |
| cd15530 | 318-363  | PHD2_d4 |
| cd15602 | 318-363  | PHD1_KDM5A |
| cd15532 | 313-363  | PHD2_CHD_II |
| cd15604 | 318-363  | PHD1_KDM5C_5D |
| cd15534 | 318-361  | PHD2_PHF12_Rco1 |
| cd15504 | 314-363  | PHD_PRHA_like |
| cd15562 | 318-363  | PHD2_PHF14 |
| cd00196 | Apr-74  | UBQ |
| cd15539 | 318-363  | PHD1_AIRE |
| cd15529 | 318-363  | PHD2_PHF10 |
| cd15523 | 331-363  | PHD_PHF21A |
| cd15594 | 318-363  | PHD2_KMT2C |
| cd15595 | 318-363  | PHD2_KMT2D |
| cd15510 | 317-363  | PHD2_KMT2C_like |
| cd15499 | 318-363  | PHD1_MTF2_PHF19_like |
| cd15535 | 318-363  | PHD1_Rco1 |
| cd01809 | Mar-74  | Scythe_N |
| cd15629 | 318-363  | PHD_BAZ2A |
| cd15531 | 318-363  | PHD1_CHD_II |
| smart00184 | 724-762  | RING |
| cd15630 | 318-363  | PHD_BAZ2B |
| cd01806 | Jan-73  | Nedd8 |
| cd15533 | 301-363  | PHD1_PHF12 |
| cd15509 | 318-363  | PHD1_KMT2C_like |
| cd15563 | 318-363  | PHD3_PHF14 |
| cd01805 | Jan-76  | RAD23_N |
| cd15497 | 318-363  | PHD1_Snt2p_like |
| cd15559 | 313-363  | PHD1_BPTF |
| pfam13639 | 724-763  | zf-RING_2 |
| cd01807 | Jan-74  | GDX_N |
| cd15590 | 318-363  | PHD2_KMT2A |
| cd15507 | 318-363  | PHD2_KMT2A_like |
| cd15502 | 312-363  | PHD_Phf1p_Phf2p_like |
| cd15541 | 313-363  | PHD_TIF1_like |
| PTZ00044 | Jan-74  | PTZ00044 |
| pfam11976 | Mar-73  | Rad60-SLD |
| pfam13923 | 724-762  | zf-C3HC4_2 |
| pfam00097 | 724-762  | zf-C3HC4 |
| cd15524 | 333-363  | PHD_PHF21B |
| cd01812 | Mar-58  | BAG1_N |
| cd04718 | 340-383  | BAH_plant_2 |
| cl02608 | 340-383  | BAH superfamily |
| cd15625 | 316-365  | PHD_TIF1delta |
| cd15610 | 332-363  | PHD3_KDM5A_like |
| cd15538 | 318-363  | PHD_PRKCBP1 |
| cd15623 | 313-363  | PHD_TIF1beta |
| pfam14634 | 725-763  | zf-RING_5 |
| cd15522 | 318-363  | PHD_TAF3 |
| cd16039 | 320-363  | PHD_SPP1 |
| cd01800 | Aug-75  | SF3a120_C |
| cd15517 | 315-363  | PHD_TCF19_like |
| cd15591 | 318-363  | PHD2_KMT2B |
| smart00213 | Mar-74  | UBQ |
| COG5432 | 715-765  | RAD18 |
| TIGR00599 | 715-763  | rad18 |
Ontology Information
| HPRD ID | 1973 |    
|---|---|
| Molecular Class | DNA binding protein |
| Molecular Function | Hydrolase activity (GO:0016787) |
| Biological Process | Metabolism (GO:0008152); Energy pathways (GO:0006091)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
