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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
UHRF1 29128 Ubiquitin-like, containing PHD and RING finger domains, 1  19Np95; hNP95; ICBP90; RNF106; hUHRF1 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22219067   2012Cell line : -

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : 144

Stage : -

real time RT-PCR,Iimmunohistochemistry with tissue microarraysUp-regulation-UHRF1 promotes CRC growth and metastasis, likely by repressing p16(ink4a), and thus it may be used as a biomarker or even a therapeutic target for CRC.

UHRF1 expression is upregulated in CRC and is associated with the progression of CRC.

22286757   2012Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

-Up-regulation-UHRF1 negatively regulates PPARG and is associated with a higher proliferative, clonogenic and migration potential.

UHRF1 overexpression, as well as PPARG-silencing, imparts higher growth rate and phenotypic features resembling those occurring in the epithelial-mesenchymal transition.

UHRF1 regulates PPARG silencing and both genes appear to be part of a complex regulatory network.

110 sporadic CRC patient sample were included.

23023523   2012Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

Immunohistochemical staining, Up-regulation-UHRF1 expression was upregulated in colorectal cancer and binds to methylated promoters of a number of tumor suppressor genes, including p16INK4A and p14ARF, by forming complexes with DNA methyltransferases and HDAC1, resulting in the induction of carcinogenesis.

UHRF1 staining was detected in the nucleus of cancer cells, while it was not detected in colonic normal mucosa.

UHRF1 may be involved in cellular proliferation and molecular pathogenesis of colorectal cancer in the right hemicolon.

231 colorectal cancer and 40 adenoma specimens were included.


Gene Details



Chromosome: 19; NC_000019.9 (4909510..4962165)

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Gene Type protein coding
Gene Family RING-type (C3HC4) zinc fingers
Description This gene encodes a member of a subfamily of RING-finger type E3 ubiquitin ligases. The protein binds to specific DNA sequences, and recruits a histone deacetylase to regulate gene expression. Its expression peaks at late G1 phase and continues during G2 and M phases of the cell cycle. It plays a major role in the G1/S transition by regulating topoisomerase IIalpha and retinoblastoma gene expression, and functions in the p53-dependent DNA damage checkpoint. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]  
Chromosome 19
Location 19p13.3
Start 4903080  
End 4962154  
Strand +  
Gene Sequence

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Length 59075  
OMIM ID 607990   
HGNC ID HGNC:12556   
Unigene ID Hs.108106    
Ensembl ID ENSG00000034063   
PharmGKB ID -   

mRNA Information


mRNA ID XM_011528182.1
Exon complement(12259..13741)  
mRNA Sequence

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Length 4339  



CDS Information


   
Locationjoin(7768..7959,26143..26397,27637..27797,29662..29877, 38449..38549,38666..38852,41053..41176,41264..41371, 42782..42886,44026..44132,47532..47694,47780..47917, 51271..51409,51571..51743,53630..53734,57578..57724)
CDS Sequence

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CCDS ID CCDS74262.1



Protein Information


      
Protein IDNP_037414.3
Protein NameUbiquitin-like, containing PHD and RING finger domains, 1
Molecular Wt. (Da)90970
Protein Sequence

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Length 806  
Uniprot IDP49327
Ensembl Protein ID ENSP00000304592  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation300;-
SPhosphorylation287;-
SPhosphorylation652;-
SPhosphorylation639;-
SPhosphorylation184;-
SPhosphorylation171;-
TPhosphorylation106;-
SPhosphorylation108;-
TPhosphorylation93;-
SPhosphorylation95;-
SPhosphorylation101;-
SPhosphorylation88;-
TPhosphorylation122;-
TPhosphorylation109;-
SPhosphorylation89
SPhosphorylation76
SPhosphorylation104
SPhosphorylation91
SPhosphorylation720
SPhosphorylation707
KAcetylation412
KAcetylation399
KAcetylation559
KAcetylation546
SPhosphorylation674
SPhosphorylation661
SPhosphorylation31
SPhosphorylation18
TPhosphorylation441
TPhosphorylation428

Enzyme Information


No matching records could be found.

PPi Information


No STRING Network could be found.

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
8350HIST1H3A4155NP_003520.1in vitro;in vivo14993289   


Pathway Information


No matching records could be found.

Structure Information


PDB ID2FAZ
Resolution2
MethodX-RAY DIFFRACTION
Chains A,B  
Molecule Ubiquitin-like containing PHD and RING finger domains protein 1  
Model View



Domain Information




ID Location Description
cd01797Jan-78  NIRF_N
cl00155Jan-78  UBQ superfamily
cd15616317-363  PHD_UHRF1
cl22851317-363  PHD_SF superfamily
cd00162724-766  RING
cl17238724-766  RING superfamily
pfam02182416-586  SAD_SRA
cl02620416-586  SAD_SRA superfamily
smart00466414-586  SRA
pfam12148140-236  DUF3590
cl13567140-236  DUF3590 superfamily
cd15525317-363  PHD_UHRF1_2
cd15617317-363  PHD_UHRF2
cd15543317-363  PHD_RSF1
cd01769Apr-74  UBL
cd15627318-363  PHD_BAZ1A
pfam00240Jun-76  ubiquitin
cd15519318-363  PHD1_Lid2p_like
cd15544317-363  PHD_BAZ1A_like
cd15536318-363  PHD_PHRF1
pfam00628318-366  PHD
cd15515317-363  PHD1_KDM5A_like
smart00249318-363  PHD
cd15513318-363  PHD5_KMT2C_like
cd15527317-363  PHD2_KAT6A_6B
cd15605318-363  PHD1_Lid_like
cd15628318-363  PHD_BAZ1B
cd15545318-363  PHD_BAZ2A_like
cd15603317-363  PHD1_KDM5B
cd01803Jan-74  Ubiquitin
cd15489318-363  PHD_SF
cd15530318-363  PHD2_d4
cd15602318-363  PHD1_KDM5A
cd15532313-363  PHD2_CHD_II
cd15604318-363  PHD1_KDM5C_5D
cd15534318-361  PHD2_PHF12_Rco1
cd15504314-363  PHD_PRHA_like
cd15562318-363  PHD2_PHF14
cd00196Apr-74  UBQ
cd15539318-363  PHD1_AIRE
cd15529318-363  PHD2_PHF10
cd15523331-363  PHD_PHF21A
cd15594318-363  PHD2_KMT2C
cd15595318-363  PHD2_KMT2D
cd15510317-363  PHD2_KMT2C_like
cd15499318-363  PHD1_MTF2_PHF19_like
cd15535318-363  PHD1_Rco1
cd01809Mar-74  Scythe_N
cd15629318-363  PHD_BAZ2A
cd15531318-363  PHD1_CHD_II
smart00184724-762  RING
cd15630318-363  PHD_BAZ2B
cd01806Jan-73  Nedd8
cd15533301-363  PHD1_PHF12
cd15509318-363  PHD1_KMT2C_like
cd15563318-363  PHD3_PHF14
cd01805Jan-76  RAD23_N
cd15497318-363  PHD1_Snt2p_like
cd15559313-363  PHD1_BPTF
pfam13639724-763  zf-RING_2
cd01807Jan-74  GDX_N
cd15590318-363  PHD2_KMT2A
cd15507318-363  PHD2_KMT2A_like
cd15502312-363  PHD_Phf1p_Phf2p_like
cd15541313-363  PHD_TIF1_like
PTZ00044Jan-74  PTZ00044
pfam11976Mar-73  Rad60-SLD
pfam13923724-762  zf-C3HC4_2
pfam00097724-762  zf-C3HC4
cd15524333-363  PHD_PHF21B
cd01812Mar-58  BAG1_N
cd04718340-383  BAH_plant_2
cl02608340-383  BAH superfamily
cd15625316-365  PHD_TIF1delta
cd15610332-363  PHD3_KDM5A_like
cd15538318-363  PHD_PRKCBP1
cd15623313-363  PHD_TIF1beta
pfam14634725-763  zf-RING_5
cd15522318-363  PHD_TAF3
cd16039320-363  PHD_SPP1
cd01800Aug-75  SF3a120_C
cd15517315-363  PHD_TCF19_like
cd15591318-363  PHD2_KMT2B
smart00213Mar-74  UBQ
COG5432715-765  RAD18
TIGR00599715-763  rad18


Ontology Information


   
HPRD ID1973
Molecular ClassDNA binding protein
Molecular FunctionHydrolase activity (GO:0016787)
Biological ProcessMetabolism (GO:0008152); Energy pathways (GO:0006091)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO