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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
WWP1 11059 WW domain containing E3 ubiquitin protein ligase 1  8AIP5; Tiul1; hSDRP1 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
17848589   2007Cell line : -

Source : Tumor Bank Network established at the Centro Nacional de Investigaciones Oncologicas (CNIO).

Sample Type : -

No. of Sample : -

Stage : -

Antibody Microarrays,Protein Labeling and Microarray Assay,Tissue Microarray Design and ImmunohistochemistryUp-regulation1.553-


Gene Details



Chromosome: 8; NC_000008.10 (87354994..87480181)

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Gene Type protein coding
Gene Family -
Description WW domain-containing proteins are found in all eukaryotes and play an important role in the regulation of a wide variety of cellular functions such as protein degradation, transcription, and RNA splicing. This gene encodes a protein which contains 4 tandem WW domains and a HECT (homologous to the E6-associated protein carboxyl terminus) domain. The encoded protein belongs to a family of NEDD4-like proteins, which are E3 ubiquitin-ligase molecules and regulate key trafficking decisions, including targeting of proteins to proteosomes or lysosomes. Alternative splicing of this gene generates at least 6 transcript variants; however, the full length nature of these transcripts has not been defined. [provided by RefSeq, Jul 2008]  
Chromosome 8
Location 8q21
Start 86342736  
End 86468265  
Strand -  
Gene Sequence

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Length 125530  
OMIM ID 602307   
HGNC ID HGNC:17004   
Unigene ID Hs.655189    
Ensembl ID ENSG00000123124   
PharmGKB ID -   

mRNA Information


mRNA ID XM_005250761.2
Exon join(1..195,26204..26296,31295..31385,37991..38129, 38770..38894,55607..55744,55840..55903,59284..59468, 68803..69139,82488..82583,84908..85082,87962..88016, 88671..88755,88880..89008,92717..92792,92898..92969, 95850..95938,99884..100043,105413..105546,105638..105778, 109824..109944,115186..115290,118489..118585, 119039..119111,124059..125530)  
mRNA Sequence

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Length 4447  



CDS Information


   
Locationjoin(31316..31385,37991..38129,38770..38894,55607..55744, 55837..55903,59284..59468,68803..69139,82488..82583, 84908..85082,87962..88016,88671..88755,88880..89008, 92717..92792,92898..92969,95850..95938,99884..100043, 105413..105546,105638..105778,109824..109944, 115186..115290,118489..118585,119039..119111, 124059..124158)
CDS Sequence

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CCDS ID CCDS6242.1



Protein Information


      
Protein IDNP_008944.1
Protein NameWW domain containing E3 ubiquitin protein ligase 1
Molecular Wt. (Da)105071
Protein Sequence

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Length 922  
Uniprot IDQ92731
Ensembl Protein ID ENSP00000267525  



Post-translational Modification Information (Source : HPRD)


Residue Type site
TPhosphorylation822;-
SPhosphorylation59
SPhosphorylation580

Enzyme Information


   
EC6.3.2.19
Nameubiquitin---protein ligase
ubiquitin-activating enzyme
ClassLigases; Forming carbon-nitrogen bonds; Acid-D-amino-acid ligases (peptide synthases)
Sysnameubiquitin:protein-lysine N-ligase (AMP-forming)  
SubstrateATP [CPD:C00002]; ubiquitin [CPD:C00496]; protein lysine  
ProductAMP [CPD:C00020]; diphosphate [CPD:C00013]; protein N-ubiquityllysine  
Reaction (IUBMB)



PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                                                                     
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
1184CLCN52053NP_001121370.1in vitro9169421   
1605DAG1546NP_004384.3in vitro9169421   
3561IL2RG2391NP_000197.1in vitro9169421   
3570IL6R1000NP_000556.1in vitro9169421   
5921RASA1745NP_002881.1in vitro9169421   
7020TFAP2A128NP_003211.1in vitro9169421   
9802DAZAP28463NP_001129738.1yeast 2-hybrid16189514   
10365KLF23602NP_057354.1in vitro;in vivo;yeast 2-hybrid11375995   
11052CPSF65401AAH00714.1yeast 2-hybrid16189514   
27332ZNF63811736NP_055312.2yeast 2-hybrid16189514   
85362C20orf15812752NP_689515.1yeast 2-hybrid16189514   


Pathway Information


            
Pathway Name Pathway ID
Endocytosis hsa04144
Ubiquitin mediated proteolysis hsa04120


Structure Information


PDB ID1ND7
Resolution2.1
MethodX-RAY DIFFRACTION
Chains A  
Molecule WW domain-containing protein 1  
Model View



Domain Information




ID Location Description
cd00078568-920  HECTc
cl00077568-920  HECTc superfamily
cd0402117-140  C2_E3_ubiquitin_ligase
cl1460317-140  C2 superfamily
cd00201352-382  WW
cl00157352-382  WW superfamily
cd00201459-488  WW
cl00157459-488  WW superfamily
cd00201499-528  WW
cl00157499-528  WW superfamily
pfam00632618-920  HECT
smart00456350-382  WW
cd0003020-103  C2
smart00456457-488  WW
pfam00397351-380  WW
pfam00397458-487  WW
pfam0016820-98  C2
smart0023919-111  C2
smart00456497-529  WW
cd0838220-99  C2_Smurf-like
pfam00397498-527  WW
cd0405120-103  C2_SRC2_like
cd0867852-137  C2_C21orf25-like
cd0404349-101  C2_Munc13_fungal
cd0403852-117  C2_ArfGAP
cd0403213-114  C2_Perforin
cd0837661-128  C2B_MCTP_PRT
cd0403151-106  C2A_RIM1alpha
cd0868120-105  C2_fungal_Inn1p-like
cd0403351-126  C2_NEDD4_NEDD4L
cd0868841-106  C2_KIAA0528-like
cd0839120-102  C2A_C2C_Synaptotagmin_like
cd0404420-101  C2A_Tricalbin-like
cd0404621-99  C2_Calpain
cd0404161-102  C2A_fungal
smart00119591-919  HECTc
COG5021307-922  HUL4
pfam05109208-412  Herpes_BLLF1
COG5104346-412  PRP40
COG5104462-527  PRP40
pfam05109154-385  Herpes_BLLF1


Ontology Information


   
HPRD ID1310
Molecular ClassUbiquitin proteasome system protein
Molecular FunctionDNA binding (GO:0003677)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO