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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
UPK1A 11045 uroplakin 1A  19TSPAN21 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
25197375   2014Cell line : -

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : 125

Stage : -

-Down-regulation-Low expression of UPKIa was a promising predictor for poor outcome of colorectal cancer patients.


Gene Details



NC_000019.9 (36157418..36169387)

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Gene Type protein coding
Gene Family Tetraspanins
Description The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate signal transduction events that play a role in the regulation of cell development, activation, growth and motility. This encoded protein is found in the asymmetrical unit membrane (AUM) where it can complex with other transmembrane 4 superfamily proteins. It may play a role in normal bladder epithelial physiology, possibly in regulating membrane permeability of superficial umbrella cells or in stabilizing the apical membrane through AUM/cytoskeletal interactions. The protein may also play a role in tumor suppression. Alternative splicing results in multiple transcript variants of this gene. [provided by RefSeq, Jul 2013]  
Chromosome 19
Location 19q13.1
Start 36157418  
End 36169387  
Strand +  
Gene Sequence

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Length 11970  
OMIM ID 611557   
HGNC ID HGNC:12577   
Unigene ID Hs.159309   
Ensembl ID ENSG00000105668   
PharmGKB ID PA37209   

mRNA Information


mRNA ID ?NM_001281443.1
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID CCDS12470.1



Protein Information


      
Protein IDNP_001268372.1
Protein Nameuroplakin 1A
Molecular Wt. (Da)0
Protein Sequence

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Length 258  
Uniprot IDQ9ULC4
Ensembl Protein ID ENSP00000360365  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
7379UPK210295NP_006751.1in vitro;in vivo12475947   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd03156112-230  uroplakin_I_like_LEL
cl02781112-230  tetraspanin_LEL superfamily
cd03127115-206  tetraspanin_LEL
cd03155112-220  CD151_like_LEL
cd03165139-220  NET-5_like_LEL
cd03163147-220  TM4SF8_like_LEL
pfam0033524-255  Tetraspannin


Ontology Information


   
HPRD ID11043
Molecular ClassCell surface receptor
Molecular FunctionDNA binding (GO:0003677)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO