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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
DSG3 1830 Desmoglein 3 (pemphigus vulgaris antigen)  18PVA; CDHF6 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22930170   2012Cell line : KM 12C, KM 12SM, HT 29

Source : ATCC

Sample Type : -

No. of Sample : -

Stage : -

Microarray analysis,Real time RT-PCR and Flow cytometryUp-regulation-Gene differentially expressed and analysed bye by Microarray.


Gene Details



Chromosome: 18; NC_000018.9 (29027732..29058665)

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Gene Type protein coding
Gene Family Cadherins / Major cadherins
Description Desmosomes are cell-cell junctions between epithelial, myocardial, and certain other cell types. Desmoglein 3 is a calcium-binding transmembrane glycoprotein component of desmosomes in vertebrate epithelial cells. Currently, three desmoglein subfamily members have been identified and all are members of the cadherin cell adhesion molecule superfamily. These desmoglein gene family members are located in a cluster on chromosome 18. This protein has been identified as the autoantigen of the autoimmune skin blistering disease pemphigus vulgaris. [provided by RefSeq, Jul 2008]  
Chromosome 18
Location 18q12.1
Start 31447769  
End 31478702  
Strand +  
Gene Sequence

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Length 30934  
OMIM ID 169615   
HGNC ID HGNC:3050   
Unigene ID Hs.1925    
Ensembl ID ENSG00000134757   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001944.2
Exon join(1..157,8672..8707,9225..9356,10677..10832, 11265..11409,12077..12243,13065..13193,13459..13644, 16343..16614,17550..17689,18762..18986,21321..21581, 24516..24655,24957..25020,26353..26636,27878..30934)  
mRNA Sequence

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Length 5561  



CDS Information


   
Location join(110..157,8672..8707,9225..9356,10677..10832, 11265..11409,12077..12243,13065..13193,13459..13644, 16343..16614,17550..17689,18762..18986,21321..21581, 24516..24655,24957..25020,26353..26636,27878..28492)
CDS Sequence

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CCDS ID CCDS11898.1



Protein Information


      
Protein IDNP_001935.2
Protein NameDesmoglein 3 (pemphigus vulgaris antigen)
Molecular Wt. (Da)101844
Protein Sequence

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Length 999  
Uniprot IDQ99933
Ensembl Protein ID ENSP00000369026  



Post-translational Modification Information (Source : HPRD)


Residue Type site
DProteolytic Cleavage781
RProteolytic Cleavage49
NGlycosylation545
SPhosphorylation387

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
11187PKP35711NP_009114.1in vivo;yeast 2-hybrid12707304   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd11304165-263  Cadherin_repeat
cl15786165-263  CA_like superfamily
cd11304271-377  Cadherin_repeat
cl15786271-377  CA_like superfamily
cd1130462-153  Cadherin_repeat
cl1578662-153  CA_like superfamily
cd11304402-491  Cadherin_repeat
cl15786402-491  CA_like superfamily
smart00112180-265  CA
pfam00028164-257  Cadherin
pfam00028272-375  Cadherin
smart0011282-155  CA
smart00112289-377  CA
pfam0002858-148  Cadherin
smart00112410-493  CA
cd0003158-153  CA_like


Ontology Information


   
HPRD ID3292
Molecular ClassAdhesion molecule
Molecular FunctionTranscription factor activity (GO:0003700)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO