Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| FAT1 | 2195 | FAT tumor suppressor homolog 1 (Drosophila)  | 4 | FAT; ME5; CDHF7; CDHR8; hFat1  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 12915469    | 2003 | Cell line : - Source : - Sample Type : CRC tumor and Normal tissue No. of Sample : 11 Stage : - | Differential methylation hybridization analysis | Methylation | - | In 11 colon tumors where RNA was available, the methylation of LMX-1 and FAT was associated with the loss of their transcripts. There was also CpG island hypermethylation of these genes in colorectal adenomas, demonstrating that these epigenetic lesions occur early in colon tumorigenesis. |
| 22968445    | 2012 | Cell line : - Source : Department of Pathology of Wrocaw Medical University. Sample Type : - No. of Sample : - Stage : - | Laser capture microdissection,FFPE-FASP,SAX fractionation,LC-MSMS,Label-free quantitation. | Up-regulation | - | A list of genes including this gene are differentially expressed analysed by LC-MS/MS technique. To compare the proteomes of colonic mucosa (normal or N) and colon cancer (cancer or C), we analyzed archival FFPE clinical samples originating from eight patients. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | Cadherins / Cadherin-related |
| Description | This gene is an ortholog of the Drosophila fat gene, which encodes a tumor suppressor essential for controlling cell proliferation during Drosophila development. The gene product is a member of the cadherin superfamily, a group of integral membrane proteins characterized by the presence of cadherin-type repeats. In addition to containing 34 tandem cadherin-type repeats, the gene product has five epidermal growth factor (EGF)-like repeats and one laminin A-G domain. This gene is expressed at high levels in a number of fetal epithelia. Its product probably functions as an adhesion molecule and/or signaling receptor, and is likely to be important in developmental processes and cell communication. Transcript variants derived from alternative splicing and/or alternative promoter usage exist, but they have not been fully described. [provided by RefSeq, Jul 2008]   |
| Chromosome | 4 |
| Location | 4q35 |
| Start | 186587783   |
| End | 186726915   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 139133   |
| OMIM ID | 600976    |
| HGNC ID | HGNC:3595    |
| Unigene ID | Hs.481371     |
| Ensembl ID | ENSG00000083857    |
| PharmGKB ID | PA28007    |
mRNA Information
| mRNA ID | NM_005245.3 |
|---|---|
| Exon | join(3083..3252,17071..20353,63303..63617,87133..87194, 90002..90331,90681..90891,93093..93232,98153..98428, 98552..98762,105141..109208,109715..109911,112572..112725, 113574..113807,115141..115530,116901..117115, 117596..117733,120703..120846,122342..122539, 122939..123740,123882..124013,125490..125647, 126556..127018,128791..128944,129124..129234, 129745..130376,131090..131227,137696..139133)   | mRNA Sequence |    Download   Select all |
| Length | 14773   |
CDS Information
| Location | join(17089..20353,63303..63617,87133..87194,90002..90331, 90681..90891,93093..93232,98153..98428,98552..98762, 105141..109208,109715..109911,112572..112725, 113574..113807,115141..115530,116901..117115, 117596..117733,120703..120846,122342..122539, 122939..123740,123882..124013,125490..125647, 126556..127018,128791..128944,129124..129234, 129745..130 |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | - |    
Protein Information
| Protein ID | NP_005236.2 |
|---|---|
| Protein Name | FAT tumor suppressor homolog 1 (Drosophila) |
| Molecular Wt. (Da) | 503885 |
| Protein Sequence |    Download   Select all |
| Length | 4588   |
| Uniprot ID | P22003 |    
| Ensembl Protein ID | ENSP00000359866   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| T | Phosphorylation | 464;- |
| Y | Phosphorylation | 468;- |
| S | Phosphorylation | 4272;- |
| S | Phosphorylation | 1496 |
| N | Glycosylation | 3715 |
| N | Glycosylation | 1939 |
| N | Glycosylation | 382 |
| S | Phosphorylation | 4473 |
| T | Phosphorylation | 192 |
| Y | Phosphorylation | 212 |
| T | Phosphorylation | 3048 |
| S | Phosphorylation | 3082 |
| S | Phosphorylation | 4476 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 9454 |    HOMER3 |    7270 |    NP_004829.3 |    in vitro |    16979624    |
| 9456 |    HOMER1 |    9211 |    NP_004263.1 |    in vitro |    16979624    |
Pathway Information
No matching records could be found.
Structure Information
| PDB ID | 1BNL |
|---|---|
| Resolution | 2.9 |
| Method | X-RAY DIFFRACTION |
| Chains | A,B,C   |
| Molecule | COLLAGEN XVIII   |
| Model | View |
Domain Information
| ID | Location | Description |
|---|---|---|
| cd11304 | 3234-3331  | Cadherin_repeat |
| cl15786 | 3234-3331  | CA_like superfamily |
| cd11304 | 1143-1241  | Cadherin_repeat |
| cl15786 | 1143-1241  | CA_like superfamily |
| cd11304 | 3339-3436  | Cadherin_repeat |
| cl15786 | 3339-3436  | CA_like superfamily |
| cd00110 | 3831-3983  | LamG |
| cl22861 | 3831-3983  | LamG superfamily |
| cd11304 | 3129-3226  | Cadherin_repeat |
| cl15786 | 3129-3226  | CA_like superfamily |
| cd11304 | 1042-1135  | Cadherin_repeat |
| cl15786 | 1042-1135  | CA_like superfamily |
| cd11304 | 826-923  | Cadherin_repeat |
| cl15786 | 826-923  | CA_like superfamily |
| cd11304 | 2813-2913  | Cadherin_repeat |
| cl15786 | 2813-2913  | CA_like superfamily |
| cd11304 | 3028-3121  | Cadherin_repeat |
| cl15786 | 3028-3121  | CA_like superfamily |
| cd11304 | 2287-2386  | Cadherin_repeat |
| cl15786 | 2287-2386  | CA_like superfamily |
| cd11304 | 1566-1658  | Cadherin_repeat |
| cl15786 | 1566-1658  | CA_like superfamily |
| cd11304 | 1769-1874  | Cadherin_repeat |
| cl15786 | 1769-1874  | CA_like superfamily |
| cd11304 | 724-818  | Cadherin_repeat |
| cl15786 | 724-818  | CA_like superfamily |
| cd11304 | 2922-3019  | Cadherin_repeat |
| cl15786 | 2922-3019  | CA_like superfamily |
| cd11304 | 1461-1558  | Cadherin_repeat |
| cl15786 | 1461-1558  | CA_like superfamily |
| cd11304 | 932-1016  | Cadherin_repeat |
| cl15786 | 932-1016  | CA_like superfamily |
| cd11304 | 153-252  | Cadherin_repeat |
| cl15786 | 153-252  | CA_like superfamily |
| cd11304 | 1671-1761  | Cadherin_repeat |
| cl15786 | 1671-1761  | CA_like superfamily |
| cd11304 | 468-565  | Cadherin_repeat |
| cl15786 | 468-565  | CA_like superfamily |
| cd11304 | 2496-2592  | Cadherin_repeat |
| cl15786 | 2496-2592  | CA_like superfamily |
| cd11304 | 2187-2279  | Cadherin_repeat |
| cl15786 | 2187-2279  | CA_like superfamily |
| cd11304 | 1363-1452  | Cadherin_repeat |
| cl15786 | 1363-1452  | CA_like superfamily |
| cd11304 | 2394-2488  | Cadherin_repeat |
| cl15786 | 2394-2488  | CA_like superfamily |
| cd11304 | 2708-2805  | Cadherin_repeat |
| cl15786 | 2708-2805  | CA_like superfamily |
| cd11304 | 3445-3536  | Cadherin_repeat |
| cl15786 | 3445-3536  | CA_like superfamily |
| cd11304 | 2601-2694  | Cadherin_repeat |
| cl15786 | 2601-2694  | CA_like superfamily |
| cd11304 | 1250-1344  | Cadherin_repeat |
| cl15786 | 1250-1344  | CA_like superfamily |
| cd11304 | 2085-2174  | Cadherin_repeat |
| cl15786 | 2085-2174  | CA_like superfamily |
| cd00054 | 4127-4163  | EGF_CA |
| cl21504 | 4127-4163  | EGF_CA superfamily |
| cd11304 | 1895-1970  | Cadherin_repeat |
| cl15786 | 1895-1970  | CA_like superfamily |
| cd11304 | 371-459  | Cadherin_repeat |
| cl15786 | 371-459  | CA_like superfamily |
| cd11304 | 575-663  | Cadherin_repeat |
| cl15786 | 575-663  | CA_like superfamily |
| cd11304 | 38-144  | Cadherin_repeat |
| cl15786 | 38-144  | CA_like superfamily |
| cd11304 | 1983-2077  | Cadherin_repeat |
| cl15786 | 1983-2077  | CA_like superfamily |
| cd11304 | 3561-3634  | Cadherin_repeat |
| cl15786 | 3561-3634  | CA_like superfamily |
| cd00054 | 4053-4088  | EGF_CA |
| cl21504 | 4053-4088  | EGF_CA superfamily |
| cd00054 | 4016-4050  | EGF_CA |
| cl21504 | 4016-4050  | EGF_CA superfamily |
| cd00054 | 4093-4125  | EGF_CA |
| cl21504 | 4093-4125  | EGF_CA superfamily |
| smart00282 | 3854-3985  | LamG |
| pfam02210 | 3859-3985  | Laminin_G_2 |
| smart00112 | 3359-3438  | CA |
| smart00112 | 3254-3333  | CA |
| pfam00028 | 3340-3430  | Cadherin |
| smart00112 | 1057-1137  | CA |
| smart00112 | 1163-1243  | CA |
| pfam00028 | 3235-3326  | Cadherin |
| pfam00028 | 1147-1236  | Cadherin |
| smart00112 | 3148-3228  | CA |
| smart00112 | 2832-2916  | CA |
| smart00112 | 846-925  | CA |
| pfam00028 | 1567-1658  | Cadherin |
| smart00112 | 3046-3123  | CA |
| smart00112 | 1795-1877  | CA |
| pfam00028 | 3130-3221  | Cadherin |
| smart00112 | 742-820  | CA |
| smart00112 | 2306-2388  | CA |
| pfam00028 | 2288-2381  | Cadherin |
| pfam00028 | 827-918  | Cadherin |
| smart00112 | 1585-1663  | CA |
| pfam00028 | 2814-2909  | Cadherin |
| pfam00028 | 3028-3116  | Cadherin |
| pfam00028 | 1041-1130  | Cadherin |
| pfam00028 | 932-1017  | Cadherin |
| pfam00054 | 3860-3987  | Laminin_G_1 |
| smart00112 | 1695-1763  | CA |
| smart00112 | 2941-3021  | CA |
| smart00112 | 486-567  | CA |
| smart00112 | 2208-2281  | CA |
| pfam00028 | 724-812  | Cadherin |
| smart00112 | 1383-1454  | CA |
| pfam00028 | 154-248  | Cadherin |
| smart00112 | 951-1017  | CA |
| pfam00028 | 468-558  | Cadherin |
| pfam00028 | 1672-1756  | Cadherin |
| smart00112 | 1479-1560  | CA |
| pfam00028 | 2923-3014  | Cadherin |
| smart00112 | 2517-2594  | CA |
| smart00112 | 172-255  | CA |
| pfam00028 | 1250-1344  | Cadherin |
| pfam00028 | 2601-2694  | Cadherin |
| smart00179 | 4127-4163  | EGF_CA |
| pfam00028 | 1770-1870  | Cadherin |
| smart00112 | 1276-1344  | CA |
| pfam00028 | 1461-1552  | Cadherin |
| pfam00028 | 1363-1442  | Cadherin |
| pfam00028 | 2187-2259  | Cadherin |
| smart00112 | 2730-2807  | CA |
| pfam00028 | 3445-3536  | Cadherin |
| pfam00028 | 1895-1969  | Cadherin |
| pfam00028 | 2497-2587  | Cadherin |
| pfam00028 | 2395-2483  | Cadherin |
| smart00112 | 3463-3543  | CA |
| smart00112 | 2413-2490  | CA |
| smart00112 | 2620-2694  | CA |
| pfam00028 | 2086-2174  | Cadherin |
| smart00112 | 1902-1970  | CA |
| pfam00028 | 2708-2799  | Cadherin |
| smart00112 | 2104-2174  | CA |
| cd00053 | 4130-4163  | EGF |
| cd00031 | 3031-3121  | CA_like |
| smart00112 | 2007-2079  | CA |
| pfam00028 | 372-454  | Cadherin |
| smart00112 | 68-147  | CA |
| cd00053 | 4016-4050  | EGF |
| smart00179 | 4016-4050  | EGF_CA |
| smart00181 | 4130-4163  | EGF |
| cd00053 | 4097-4125  | EGF |
| pfam00028 | 575-663  | Cadherin |
| smart00112 | 393-461  | CA |
| smart00112 | 592-663  | CA |
| smart00179 | 4093-4125  | EGF_CA |
| cd00053 | 4055-4088  | EGF |
| smart00179 | 4053-4088  | EGF_CA |
| pfam00028 | 1984-2060  | Cadherin |
| pfam05444 | 3996-4116  | DUF753 |
| cl20294 | 3996-4116  | DUF753 superfamily |
| pfam00008 | 4131-4161  | EGF |
| pfam00008 | 4093-4123  | EGF |
| pfam00008 | 4017-4046  | EGF |
| cd00031 | 1079-1135  | CA_like |
| pfam07645 | 4127-4158  | EGF_CA |
| pfam00028 | 39-140  | Cadherin |
| smart00112 | 3568-3631  | CA |
| cd00031 | 1465-1558  | CA_like |
| pfam13385 | 3863-3982  | Laminin_G_3 |
| pfam00008 | 4056-4086  | EGF |
| pfam12947 | 4124-4162  | EGF_3 |
| smart00112 | 277-356  | CA |
| cl15786 | 277-356  | CA_like superfamily |
| cd00031 | 3132-3226  | CA_like |
| smart00181 | 4093-4125  | EGF |
| smart00181 | 4016-4050  | EGF |
| pfam06247 | 4022-4153  | Plasmod_Pvs28 |
Ontology Information
| HPRD ID | 210 |    
|---|---|
| Molecular Class | Adhesion molecule |
| Molecular Function | Receptor binding (GO:0005102) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
