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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
SLC39A14 23516 solute carrier family 39 (zinc transporter), member 14  8KIAA0062, NET34, ZIP14 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22173985   2012Cell line : -

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : 244

Stage : -

Exon-specific quantitative RT-PCRSplicing alteration-SLC39A14-exon4B transcript variant is a CRC biomarker with high sensitivity and organ-confined specificity.

Exon-specific quantitative RT-PCR analyses across 136 Stage I-IV CRC samples and 44 normal colonic mucosa samples showed complete cancer-specificity, as well as 94% sensitivity of SLC39A14-exon4B relative to SLC39A14-exon4A expression.


Gene Details



Chromosome 8 - NC_000008.11 (22367249..22434129)

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Gene Type protein coding
Gene Family Solute carriers
Description Zinc is an essential cofactor for hundreds of enzymes. It is involved in protein, nucleic acid, carbohydrate, and lipid metabolism, as well as in the control of gene transcription, growth, development, and differentiation. SLC39A14 belongs to a subfamily of proteins that show structural characteristics of zinc transporters (Taylor and Nicholson, 2003 [PubMed 12659941]).[  
Chromosome 8
Location 8p21.2
Start 22367249  
End 22434129  
Strand +  
Gene Sequence

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Length 66881  
OMIM ID 608736   
HGNC ID HGNC:20858   
Unigene ID Hs.491232   
Ensembl ID ENSG00000104635   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001135154.1
Exon join(1..160,37448..37732,41062..41248,44789..44958, 47532..47654,48521..48709,48825..49032,50403..50587, 66643..66881)  
mRNA Sequence

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Length 4699  



CDS Information


   
Locationjoin(25970..25984,37448..37732,41062..41248,44789..44958, 47532..47654,48521..48709,48825..49032,50403..50587, 52304..52450)
CDS Sequence

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CCDS ID -



Protein Information


      
Protein IDNP_001121903.1
Protein Namesolute carrier family 39 (zinc transporter), member 14
Molecular Wt. (Da)50842
Protein Sequence

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Length 492  
Uniprot IDP35968
Ensembl Protein ID ENSP00000263923  



Post-translational Modification Information (Source : HPRD)


Residue Type site
NGlycosylation76
NGlycosylation101

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam02535151-483  Zip
cl00437151-483  Zip superfamily
COG0428334-482  ZupT


Ontology Information


   
HPRD ID4475
Molecular ClassTransport/cargo protein
Molecular FunctionReceptor binding (GO:0005102)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO