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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
BCL6B 255877 B-cell CLL/lymphoma 6, member B  17ZBTB28, BAZF 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
25973304   2015Cell line : -

Source : Chinese PLA General Hospital.

Sample Type : CRC tumor and normal tissue

No. of Sample : 102

Stage : TNM Stage I-IV

real time RT-PCR,Bisulfite modification, methylation specific PCR and bisulfite sequencing ,Immunohistochemistry,Flow cytometry,Cell viability assayMethylation-�Methylation of�BCL6B�is a prognostic and chemo-sensitive marker in�colorectal cancer.�BCL6B�suppresses�colorectal cancer�growth by activating P53 signaling.


Gene Details



NC_000017.10 (6926368..6933609)

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Gene Type protein coding
Gene Family -, "Zinc fingers, C2H2-type", "BTB/POZ domain containing"
Description -  
Chromosome 17
Location 17p13.1
Start 6926368  
End 6933609  
Strand +  
Gene Sequence

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Length 7242  
OMIM ID 608992   
HGNC ID HGNC:1002   
Unigene ID Hs.22575   
Ensembl ID ENSG00000161940   
PharmGKB ID PA25313   

mRNA Information


mRNA ID ?NM_181844.3
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID -



Protein Information


      
Protein IDNP_862827.1
Protein NameB-cell CLL/lymphoma 6, member B
Molecular Wt. (Da)0
Protein Sequence

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Length 479  
Uniprot IDQ6UXX9
Ensembl Protein ID ENSP00000276659  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
604BCL6180NP_620309.1in vitro;in vivo9632807   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam0065128-134  BTB
cl0251828-134  BTB superfamily
smart0022539-131  BTB
pfam13465370-395  zf-H2C2_2
cl22375370-395  zf-H2C2_2 superfamily
pfam13465398-423  zf-H2C2_2
cl22375398-423  zf-H2C2_2 superfamily
pfam13465427-451  zf-H2C2_2
cl22375427-451  zf-H2C2_2 superfamily
pfam13465342-367  zf-H2C2_2
cl22375342-367  zf-H2C2_2 superfamily
COG5048354-411  COG5048
COG5048316-461  COG5048
COG5189323-430  SFP1
COG5048410-446  COG5048
COG5048382-439  COG5048
COG5048313-383  COG5048
PHA00733411-463  PHA00733


Ontology Information


   
HPRD ID17536
Molecular ClassTranscription regulatory protein
Molecular FunctionReceptor binding (GO:0005102)
Biological ProcessSignal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO