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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
IL12B 3593 interleukin 12B  5CLMF, IL-12B, NKSF, CLMF2 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
24909386   2014Cell line : -

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : 91

Stage : -

ELISADown-regulation-Findings show clinical significance of the preoperative serum concentration for IL-12p40 and provide an additional prognostic biomarker for CRC survival.

The levels of circulating interleukin IL-12p40 significantly decreased with the progression of CRC, whereas the levels of IL-23 remained with no significant differences between disease stages.


Gene Details



Chromosome 5 - NC_000005.10 (159314783..159330473, complement)

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Gene Type protein coding
Gene Family Interleukins and interleukin receptors, "Immunoglobulin superfamily / Immunoglobulin-like domain containing"
Description This gene encodes a subunit of interleukin 12, a cytokine that acts on T and natural killer cells, and has a broad array of biological activities. Interleukin 12 is a disulfide-linked heterodimer composed of the 40 kD cytokine receptor like subunit encoded by this gene, and a 35 kD subunit encoded by IL12A. This cytokine is expressed by activated macrophages that serve as an essential inducer of Th1 cells development. This cytokine has been found to be important for sustaining a sufficient number of memory/effector Th1 cells to mediate long-term protection to an intracellular pathogen. Overexpression of this gene was observed in the central nervous system of patients with multiple sclerosis (MS), suggesting a role of this cytokine in the pathogenesis of the disease. The promoter polymorphism of this gene has been reported to be associated with the severity of atopic and non-atopic asthma in children.  
Chromosome 5
Location 5q31.1-q33
Start 159314783  
End 159330473  
Strand -  
Gene Sequence

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Length 15691  
OMIM ID 161561   
HGNC ID HGNC:5970   
Unigene ID Hs.674   
Ensembl ID ENSG00000113302   
PharmGKB ID -   

mRNA Information


mRNA ID NM_002187.2
Exon join(1..42,3692..3779,7145..7420,7963..8080,9954..10168, 11581..11738,13658..13789,14374..15691)  
mRNA Sequence

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Length 2347  



CDS Information


   
Location join(3692..3779,7145..7420,7963..8080,9954..10168, 11581..11738,13658..13789)
CDS Sequence

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CCDS ID CCDS4346.1



Protein Information


      
Protein IDNP_002178.2
Protein Nameinterleukin 12B
Molecular Wt. (Da)34697
Protein Sequence

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Length 328  
Uniprot IDP14210
Ensembl Protein ID ENSP00000222390  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation162
SPhosphorylation163

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
3592IL12A1193NP_000873.2in vitro10899108   


Pathway Information


                                                                                                                  
Pathway Name Pathway ID
African trypanosomiasis hsa05143
Allograft rejection hsa05330
Amoebiasis hsa05146
Chagas disease (American trypanosomiasis) hsa05142
Cytokine-cytokine receptor interaction hsa04060
Herpes simplex infection hsa05168
Inflammatory bowel disease (IBD) hsa05321
Influenza A hsa05164
Jak-STAT signaling pathway hsa04630
Legionellosis hsa05134
Leishmaniasis hsa05140
Measles hsa05162
Pertussis hsa05133
Proteoglycans in cancer hsa05205
RIG-I-like receptor signaling pathway hsa04622
Toll-like receptor signaling pathway hsa04620
Toxoplasmosis hsa05145
Tuberculosis hsa05152
Type I diabetes mellitus hsa04940


Structure Information


PDB ID1F42
Resolution2.5
MethodX-RAY DIFFRACTION
Chains A  
Molecule INTERLEUKIN-12 BETA CHAIN  
Model View



Domain Information




ID Location Description
cd00063235-325  FN3
cl21522235-325  FN3 superfamily
pfam10420125-217  IL12p40_C
cl11074125-217  IL12p40_C superfamily
smart0040842-90  IGc2
smart0041042-91  IG_like
smart0040942-91  IG


Ontology Information


   
HPRD ID3080
Molecular ClassCytokine
Molecular FunctionCatalytic activity (GO:0003824)
Biological ProcessMetabolism (GO:0008152); Energy pathways (GO:0006091)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
P29460DB05679UstekinumabBiotechDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO