Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| LAMB3 | 3914 | Laminin, beta 3  | 1 | LAM5; LAMNB1; BM600-125KDA  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 22930170    | 2012 | Cell line : KM 12C, KM 12SM , HT 29 Source : ATCC Sample Type : - No. of Sample : - Stage : - | Microarray analysis,Real time RT-PCR and Flow cytometry | Up-regulation | - | Gene differentially expressed and analysed bye by Microarray. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | Laminins |
| Description | The product encoded by this gene is a laminin that belongs to a family of basement membrane proteins. This protein is a beta subunit laminin, which together with an alpha and a gamma subunit, forms laminin-5. Mutations in this gene cause epidermolysis bullosa junctional Herlitz type, and generalized atrophic benign epidermolysis bullosa, diseases that are characterized by blistering of the skin. Multiple alternatively spliced transcript variants that encode the same protein have been found for this gene. [provided by RefSeq, Jul 2008]   |
| Chromosome | 1 |
| Location | 1q32 |
| Start | 209614870   |
| End | 209652475   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 37606   |
| OMIM ID | 150310    |
| HGNC ID | HGNC:6490    |
| Unigene ID | Hs.497636     |
| Ensembl ID | ENSG00000196878    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_000228.2 |
|---|---|
| Exon | join(1..107,1495..1559,2358..2512,13828..13942, 14495..14568,17838..18029,19343..19406,19700..19893, 21741..21861,22551..22739,24286..24441,24897..25093, 25498..25609,26450..26828,28476..28636,28751..28971, 29297..29494,29796..29940,33817..34024,34428..34569, 34890..35066,35852..36005,37069..37606)   | mRNA Sequence |    Download   Select all |
| Length | 4093   |
CDS Information
| Location | join(1532..1559,2358..2512,13828..13942,14495..14568, 17838..18029,19343..19406,19700..19893,21741..21861, 22551..22739,24286..24441,24897..25093,25498..25609, 26450..26828,28476..28636,28751..28971,29297..29494, 29796..29940,33817..34024,34428..34569,34890..35066, 35852..36005,37069..37205) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS1487.1 |    
Protein Information
| Protein ID | NP_000219.2 |
|---|---|
| Protein Name | Laminin, beta 3 |
| Molecular Wt. (Da) | 127645 |
| Protein Sequence |    Download   Select all |
| Length | 1172   |
| Uniprot ID | P48509 |    
| Ensembl Protein ID | ENSP00000324101   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| T | Phosphorylation | 1170 |
| T | Phosphorylation | 1170 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 649 |    BMP1 |    209 |    NP_006120.1 |    in vitro;in vivo |    10806203    |
| 1294 |    COL7A1 |    358 |    NP_000085.1 |    in vitro;in vivo |    9989793    |
| 3918 |    LAMC2 |    1031 |    NP_005553.2 |    in vivo |    10964684    |
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| Amoebiasis |    hsa05146 |    
| ECM-receptor interaction |    hsa04512 |    
| Focal adhesion |    hsa04510 |    
| Pathways in cancer |    hsa05200 |    
| PI3K-Akt signaling pathway |    hsa04151 |    
| Small cell lung cancer |    hsa05222 |    
| Toxoplasmosis |    hsa05145 |    
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd00055 | 378-429  | EGF_Lam |
| cl22875 | 378-429  | EGF_Lam superfamily |
| cd00055 | 533-582  | EGF_Lam |
| cl22875 | 533-582  | EGF_Lam superfamily |
| cd00055 | 430-479  | EGF_Lam |
| cl22875 | 430-479  | EGF_Lam superfamily |
| cd00055 | 480-532  | EGF_Lam |
| cl22875 | 480-532  | EGF_Lam superfamily |
| cd00055 | 249-304  | EGF_Lam |
| cl22875 | 249-304  | EGF_Lam superfamily |
| cd00055 | 315-369  | EGF_Lam |
| cl22875 | 315-369  | EGF_Lam superfamily |
| smart00136 | 20-248  | LamNT |
| cl02806 | 20-248  | Laminin_N superfamily |
| pfam00055 | 26-248  | Laminin_N |
| pfam00053 | 379-428  | Laminin_EGF |
| smart00180 | 379-428  | EGF_Lam |
| smart00180 | 534-576  | EGF_Lam |
| pfam00053 | 431-478  | Laminin_EGF |
| pfam00053 | 534-571  | Laminin_EGF |
| smart00180 | 431-478  | EGF_Lam |
| pfam00053 | 481-534  | Laminin_EGF |
| smart00180 | 481-531  | EGF_Lam |
| pfam00053 | 250-307  | Laminin_EGF |
| cd11386 | 862-1076  | MCP_signal |
| cl21547 | 862-1076  | MCP_signal superfamily |
| pfam00053 | 316-367  | Laminin_EGF |
| cd00176 | 894-1092  | SPEC |
| cl02488 | 894-1092  | SPEC superfamily |
| smart00180 | 278-302  | EGF_Lam |
| smart00180 | 316-369  | EGF_Lam |
| smart00283 | 844-1071  | MA |
| TIGR02168 | 820-1115  | SMC_prok_B |
| pfam13514 | 602-1166  | AAA_27 |
| TIGR02169 | 826-1162  | SMC_prok_A |
| COG1196 | 817-1135  | Smc |
| COG1196 | 832-1157  | Smc |
| COG0419 | 590-1115  | SbcC |
| PRK02224 | 834-1158  | PRK02224 |
| TIGR02169 | 853-1158  | SMC_prok_A |
| TIGR02168 | 645-1162  | SMC_prok_B |
| COG1196 | 837-1132  | Smc |
| COG1196 | 933-1162  | Smc |
| COG1196 | 600-970  | Smc |
| TIGR02169 | 933-1162  | SMC_prok_A |
| pfam12128 | 836-1025  | DUF3584 |
| TIGR02168 | 832-1162  | SMC_prok_B |
| TIGR02168 | 958-1162  | SMC_prok_B |
| COG4372 | 827-1112  | COG4372 |
| pfam04012 | 951-1127  | PspA_IM30 |
| TIGR02168 | 601-1114  | SMC_prok_B |
| COG4942 | 827-1137  | EnvC |
| TIGR02168 | 836-1119  | SMC_prok_B |
| COG0419 | 845-1159  | SbcC |
| pfam10174 | 836-1158  | Cast |
| COG0840 | 840-1082  | Tar |
| COG4477 | 909-1162  | EzrA |
| COG1842 | 951-1129  | PspA |
| pfam06008 | 820-1061  | Laminin_I |
| pfam01576 | 838-1133  | Myosin_tail_1 |
| COG3206 | 867-1113  | GumC |
| TIGR02168 | 934-1159  | SMC_prok_B |
| TIGR00606 | 620-1160  | rad50 |
| pfam01576 | 838-1164  | Myosin_tail_1 |
| pfam12128 | 837-1135  | DUF3584 |
| TIGR02956 | 830-1063  | TMAO_torS |
| COG0845 | 832-1075  | AcrA |
| COG4372 | 833-1025  | COG4372 |
| COG4477 | 843-1165  | EzrA |
| TIGR00618 | 936-1157  | sbcc |
| PRK03918 | 930-1162  | PRK03918 |
| pfam10174 | 847-1161  | Cast |
| pfam12128 | 618-1140  | DUF3584 |
| pfam05557 | 843-1158  | MAD |
| TIGR02680 | 836-1078  | TIGR02680 |
| COG4372 | 942-1156  | COG4372 |
| pfam04012 | 970-1158  | PspA_IM30 |
| COG1196 | 994-1159  | Smc |
| pfam10174 | 949-1162  | Cast |
| pfam15070 | 834-1100  | GOLGA2L5 |
| TIGR01843 | 931-1109  | type_I_hlyD |
| COG4372 | 1005-1164  | COG4372 |
| COG4477 | 862-1124  | EzrA |
| pfam10174 | 835-1161  | Cast |
| COG1579 | 932-1168  | COG1579 |
| PRK06975 | 825-964  | PRK06975 |
| TIGR02680 | 641-1094  | TIGR02680 |
| pfam00015 | 832-989  | MCPsignal |
| pfam07111 | 831-1092  | HCR |
| pfam07111 | 839-1134  | HCR |
| PRK10246 | 828-1020  | PRK10246 |
| PRK02224 | 824-1159  | PRK02224 |
| pfam04012 | 930-1077  | PspA_IM30 |
| TIGR02977 | 934-1128  | phageshock_pspA |
| pfam07888 | 838-1133  | CALCOCO1 |
| PRK04863 | 843-1155  | mukB |
| pfam13514 | 609-1118  | AAA_27 |
| COG1538 | 845-1079  | TolC |
| TIGR03007 | 845-1100  | pepcterm_ChnLen |
| PRK14473 | 1008-1125  | PRK14473 |
| COG1538 | 837-1027  | TolC |
| pfam00529 | 830-1011  | HlyD |
| COG1842 | 850-1070  | PspA |
| pfam06818 | 928-1091  | Fez1 |
Ontology Information
| HPRD ID | 305 |    
|---|---|
| Molecular Class | Extracellular matrix protein |
| Molecular Function | Protein tyrosine/serine/threonine phosphatase activity (GO:0008138) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
