Search results:


General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
MNDA 4332 Myeloid cell nuclear differentiation antigen  1PYHIN3 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and normal tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysis Up-regulation-This genes are differenitially expressed between colorectal adenoma and Colorectal cancer tissue.


Gene Details



Chromosome: 1; NC_000001.10 (158801168..158819270)

View Larger Image
   
Gene Type protein coding
Gene Family -
Description The myeloid cell nuclear differentiation antigen (MNDA) is detected only in nuclei of cells of the granulocyte-monocyte lineage. A 200-amino acid region of human MNDA is strikingly similar to a region in the proteins encoded by a family of interferon-inducible mouse genes, designated Ifi-201, Ifi-202, and Ifi-203, that are not regulated in a cell- or tissue-specific fashion. The 1.8-kb MNDA mRNA, which contains an interferon-stimulated response element in the 5-prime untranslated region, was significantly upregulated in human monocytes exposed to interferon alpha. MNDA is located within 2,200 kb of FCER1A, APCS, CRP, and SPTA1. In its pattern of expression and/or regulation, MNDA resembles IFI16, suggesting that these genes participate in blood cell-specific responses to interferons. [provided by RefSeq, Jul 2008]  
Chromosome 1
Location 1q22
Start 158831378  
End 158849480  
Strand +  
Gene Sequence

   Download   Select all

Length 18103  
OMIM ID 159553   
HGNC ID HGNC:7183   
Unigene ID Hs.153837    
Ensembl ID ENSG00000163563   
PharmGKB ID -   

mRNA Information


mRNA ID NM_002432.1
Exon join(1..180,10757..11041,11902..12038,12578..12745, 14210..14626,16351..16539,17813..18103)  
mRNA Sequence

   Download   Select all

Length 1670  



CDS Information


   
Location join(10777..11041,11902..12038,12578..12745,14210..14626, 16351..16539,17813..17860)
CDS Sequence

   Download   Select all

CCDS ID CCDS1177.1



Protein Information


      
Protein IDNP_002423.1
Protein NameMyeloid cell nuclear differentiation antigen
Molecular Wt. (Da)45705
Protein Sequence

   Download   Select all

Length 407  
Uniprot IDP06731
Ensembl Protein ID ENSP00000221992  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                          
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
983CDK1302NP_001777.1in vitro16458891   
1017CDK2310NP_001789.2in vitro16458891   
3212HOXB2854NP_002136.1in vitro16458891   
5925RB11574NP_000312.2in vitro;in vivo16458891   
5934RBL21576NP_005602.3in vitro16458891   
7157TP531859NP_000537.3in vitro16458891   


Pathway Information


No matching records could be found.

Structure Information


PDB ID2DBG
Resolution-
MethodSOLUTION NMR
Chains A  
Molecule Myeloid cell nuclear differentiation antigen  
Model View



Domain Information




ID Location Description
cd08305Oct-83  Pyrin
cl14633Oct-83  DD superfamily
pfam02760208-375  HIN
cl08357208-375  HIN superfamily
pfam02758Jun-84  PYRIN


Ontology Information


   
HPRD ID16450
Molecular ClassTranscription factor
Molecular FunctionCell adhesion molecule activity (GO:0005194)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO