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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
SERPINA1 5265 Serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1  14PI; A1A; AAT; PI1; A1AT; PRO2275; alpha1AT 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and normal tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysisDown-regulation--


Gene Details



Chromosome: 14; NC_000014.8 (94843084..94857029, complement)

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Gene Type protein coding
Gene Family -
Description The protein encoded by this gene is secreted and is a serine protease inhibitor whose targets include elastase, plasmin, thrombin, trypsin, chymotrypsin, and plasminogen activator. Defects in this gene can cause emphysema or liver disease. Several transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]  
Chromosome 14
Location 14q32.1
Start 94376747  
End 94390692  
Strand -  
Gene Sequence

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Length 13946  
OMIM ID 107400   
HGNC ID HGNC:8941   
Unigene ID Hs.525557    
Ensembl ID ENSG00000197249   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001002235.2
Exon join(1..236,7452..8101,9552..9822,11082..11229, 12053..13946)  
mRNA Sequence

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Length 3513  



CDS Information


   
Locationjoin(7456..8101,9552..9822,11082..11229,12053..12244)
CDS Sequence

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CCDS ID CCDS9925.1



Protein Information


      
Protein IDNP_000286.3
Protein NameSerpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
Molecular Wt. (Da)44325
Protein Sequence

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Length 418  
Uniprot IDP02462
Ensembl Protein ID ENSP00000364979  



Post-translational Modification Information (Source : HPRD)


Residue Type site
NGlycosylation107
CS-Nitrosylation256
NGlycosylation271
NGlycosylation70
NGlycosylation107
CS-Nitrosylation256
NGlycosylation271
NGlycosylation70
NGlycosylation107
CS-Nitrosylation256
NGlycosylation271
NGlycosylation70
FProteolytic Cleavage376
FProteolytic Cleavage376
FProteolytic Cleavage376
AProteolytic Cleavage24
AProteolytic Cleavage24
AProteolytic Cleavage24
AProteolytic Cleavage374
TPhosphorylation333
TPhosphorylation333
TPhosphorylation333
SPhosphorylation383
SPhosphorylation383
SPhosphorylation383

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                          
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
1504CTRB1345NP_001897.4in vitro6983488   
1511CTSG289NP_001902.1in vitro15131125   
1990CELA1553NP_001962.3in vitro;in vivo619   197   961   536   321   000   000   
1991ELANE554NP_001963.1in vitro1   086   701   416   321   980   
5644PRSS12039NP_002760.1in vitro11057674   
5657PRTN31512NP_002768.3in vitro12114510   


Pathway Information


      
Pathway Name Pathway ID
Complement and coagulation cascades hsa04610


Structure Information


PDB ID1ATU
Resolution2.7
MethodX-RAY DIFFRACTION
Chains A  
Molecule ALPHA-1-ANTITRYPSIN  
Model View



Domain Information




ID Location Description
cd0205655-412  alpha-1-antitrypsin_like
cl0013755-412  SERPIN superfamily
smart0009359-415  SERPIN
pfam0007952-415  Serpin
cd0017253-412  SERPIN
cd0205857-415  PAI-2
cd0205955-415  ovalbumin_like
cd0204456-415  ov-serpin
cd0205549-412  PZI
cd0204953-412  bacterial_SERPIN
cd0204854-415  neuroserpin
COG482657-415  SERPIN
cd0204755-416  HCII
cd0205248-415  PEDF
cd0205155-415  PAI-1_nexin-1
cd0204555-412  antithrombin-III_like
cd0204655-412  hsp47
cd0205757-415  maspin_like
cd0205454-415  angiotensinogen
cd0204363-415  plant_SERPIN
cd0205054-412  C1_inh
cd0205357-412  alpha2AP
PHA0294862-415  PHA02948
PHA0266048-415  PHA02660


Ontology Information


   
HPRD ID2364
Molecular ClassProtease inhibitor
Molecular FunctionExtracellular matrix structural constituent (GO:0005201)
Biological ProcessCell growth and/or maintenance (GO:0008151)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO