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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
PKM 5315 pyruvate kinase, muscle  15PK3; TCB; OIP3; PKM2; CTHBP; THBP1 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20812987   2010Cell line : -

Source : Nanfang Hospital tumour tissue bank.

Sample Type : -

No. of Sample : 150 CRC patients

Stage : -

2-D Gel electrophoresis, and mass spectrometry,Western blotting, ImmunohistochemistryDown-regulation-This gene differentially expressed in between normal colorectal tissue and colorectal cancer tissue experiment done by 2-D Gel eclectrophotesis

In total, 150 patients were involved in the study.

22807066   2012Cell line : -

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : 93 CRC, 41 advanced adenomas, 137 adenomas, 47 non-adenomatous polyps, and 158 normal

Stage : TNM Stage I-IV

Immunoblotting and Histochemical Staining,Real-Time PCR,Cell Proliferation Assay,Cell Migration Assay.Up-regulation-PKM2 might be a potential therapeutic target for CRC.Expression of PKM2 was increased in CRC and the increased PKM2 expression was associated with later stage and lymph metastasis of the tumors.

24686087   2014Cell line : -

Source : Offenbach Municipal Hospital

Sample Type : CRC tumor and normal tissue

No. of Sample : 96 study participants (33 patients with colorectal cancer, 21 patients with rectal carcinoma and 42 controls)

Stage : -

real time RT-PCR,Western blotting,mutagenesis and cell transfection,Wound healing assay,Cell adhesion assay, Pyruvate kinase assayUp-regulation-PKM2 overexpression promotes CRC cell migration and cell adhesion by regulating STAT3-associated signalling and that PKM2 may serve as a therapeutic target for CRC metastasis.

22737276   2012Cell line : RKO, SW480, HT29

Source : Department of Surgery, Affiliated Zhongshan Hospital of Fudan University.

Sample Type : CRC Tumor and adjescent tissue

No. of Sample : -

Stage : -

ELISAUp-regulation-Serum M2-PK can be used as a primary screening test in CRC mass screening. It may be a promising non-invasive biomarker for CRC early detection.

Average serum M2-PK (U/mL) was 14.75 among stage III and 13.10 among stage I and II CRC patients, about 4 times higher than that among normal people.

17109496   2006Cell line : DLD1

Source : ATCC

Sample Type : -

No. of Sample : -

Stage : -

ELISAUp-regulation-Fecal tumor M2-PK is an appropriately sensitive tool to pre-select those patients requiring colonoscopy for the further diagnostic confirmation or exclusion of colorectal cancer.

Colorectal tumors were accompanied by a highly significant increase (P < 0.001) in fecal tumor M2-PK levels (median: colon carcinoma, 23.1 kU/L; rectal carcinoma, 6.9 kU/L; colorectal carcinoma, 14.7 kU/L), which correlated with Duke's staging and T-classification


Gene Details



Chromosome: 15; NC_000015.9 (72491370..72523727, complement)

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Gene Type protein coding
Gene Family -
Description This gene encodes a protein involved in glycolysis. The encoded protein is a pyruvate kinase that catalyzes the transfer of a phosphoryl group from phosphoenolpyruvate to ADP, generating ATP and pyruvate. This protein has been shown to interact with thyroid hormone and may mediate cellular metabolic effects induced by thyroid hormones. This protein has been found to bind Opa protein, a bacterial outer membrane protein involved in gonococcal adherence to and invasion of human cells, suggesting a role of this protein in bacterial pathogenesis. Several alternatively spliced transcript variants encoding a few distinct isoforms have been reported. [provided by RefSeq, May 2011]  
Chromosome 15
Location 15q22
Start 72199029  
End 72231812  
Strand -  
Gene Sequence

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Length 32784  
OMIM ID 179050   
HGNC ID HGNC:9021   
Unigene ID Hs.534770   
Ensembl ID ENSG00000067225   
PharmGKB ID -   

mRNA Information


mRNA ID XM_005254445.3
Exon join(1..489,12703..12869,14313..14404,21335..21466, 21954..22140,22922..23192,24536..24686,24933..25085, 29193..29359,31158..31339,32057..32784)  
mRNA Sequence

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Length 2294  



CDS Information


   
Location join(826..917,12703..12869,14313..14404,21335..21466, 21954..22140,22922..23192,24536..24686,24933..25085, 29193..29359,31158..31339,32057..32163)
CDS Sequence

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CCDS ID -



Protein Information


      
Protein IDNP_872270.1
Protein Namepyruvate kinase, muscle
Molecular Wt. (Da)57931
Protein Sequence

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Length 531  
Uniprot IDP12111
Ensembl Protein ID ENSP00000295550  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation37;-
SPhosphorylation37;-
SPhosphorylation37;-
TPhosphorylation328;-
TPhosphorylation328;-
TPhosphorylation328;-
SAcetylation2
SAcetylation2
SAcetylation2
TPhosphorylation45
TPhosphorylation45
TPhosphorylation45
KAcetylation266
KAcetylation266
KAcetylation266
KAcetylation62
KAcetylation62
KAcetylation62
KAcetylation89
KAcetylation89
KAcetylation89
KAcetylation433
KAcetylation305
KAcetylation305
KAcetylation305
KAcetylation166
KAcetylation166
KAcetylation166
KAcetylation135
KAcetylation135
KAcetylation135
YPhosphorylation105
YPhosphorylation105
YPhosphorylation105
CS-Nitrosylation49
CS-Nitrosylation49
CS-Nitrosylation49
YPhosphorylation390
SPhosphorylation57
SPhosphorylation57
SPhosphorylation57
TPhosphorylation129
TPhosphorylation129
TPhosphorylation129
SPhosphorylation172
SPhosphorylation172
SPhosphorylation172
SPhosphorylation287
SPhosphorylation287
SPhosphorylation287
TPhosphorylation405
SPhosphorylation406

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                             
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
5894RAF11265NP_002871.1yeast 2-hybrid12620389   
6462SHBG1646NP_001031.2yeast 2-hybrid15862967   
93145OLFM210127NP_477512.1yeast 2-hybrid16169070   


Pathway Information


                                                            
Pathway Name Pathway ID
Biosynthesis of amino acids hsa01230
Carbon metabolism hsa01200
Central carbon metabolism in cancer hsa05230
Glucagon signaling pathway hsa04922
Glycolysis / Gluconeogenesis hsa00010
Metabolic pathways hsa01100
Purine metabolism hsa00230
Pyruvate metabolism hsa00620
Type II diabetes mellitus hsa04930
Viral carcinogenesis hsa05203


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd0028842-530  Pyruvate_Kinase
cl2148142-530  Pyruvate_Kinase superfamily
pfam0022442-395  PK
PRK0673948-386  PRK06739
PRK1472538-402  PRK14725
pfam02887409-528  PK_C
cl19522409-528  PK_C superfamily
TIGR0106443-527  pyruv_kin
COG046943-530  PykF
PRK0582643-514  PRK05826
PLN0246145-512  PLN02461
PRK0920643-527  PRK09206
PRK0635430-527  PRK06354
PTZ0030069-530  PTZ00300
PTZ000668-531  PTZ00066
PRK0624742-527  PRK06247
PLN0276545-511  PLN02765
PLN0262337-517  PLN02623
PLN0276242-531  PLN02762
PRK0818738-378  PRK08187


Ontology Information


   
HPRD ID3632
Molecular ClassUnknown
Molecular FunctionTranscription factor activity (GO:0003700)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
P14618DB00119Pyruvic acidSmallMoleculeDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO