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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
SLC3A2 6520 Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2  114F2; CD98; MDU1; 4F2HC; 4T2HC; NACAE; CD98HC 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
17192196   2006Cell line : -

Source : Biochain Institute, Inc. (Hayward, CA).

Sample Type : CRC tumor and normal tissue, Blood sample

No. of Sample : 10 matched-pairs primary colon tumor and adjascent tissue

Stage : -

Microarray, Exon-centric array (GeneChip Human Exon 1.0 ST), RT-PCR.Differential splicing-Transcripts for SLC3A2 are shifted to a higher molecular weight, indicating the inclusion of various combinations of exons 2, 3 and 4 in tumor samples that are much less prevalent in normal tissue.

20522643   2010Cell line : HCT 116

Source : Jackson Laboratory

Sample Type : Mouse model

No. of Sample : -

Stage : -

Polyamine transport assay in cells, Western blot analysis and Bicinchoninic acid (BCA) protein assayUp-regulation--

22968445   2012Cell line : -

Source : Department of Pathology of Wrocaw Medical University.

Sample Type : CRC tumor and normal tissue, Blood sample

No. of Sample : 63 CRC patient samples

Stage : -

Laser capture microdissection,FFPE-FASP,SAX fractionation,LC-MSMS,Label-free quantitation.Up-regulation7.3-


Gene Details



Chromosome: 11; NC_000011.9 (62623484..62656355)

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Gene Type protein coding
Gene Family Solute carriers
Description This gene is a member of the solute carrier family and encodes a cell surface, transmembrane protein. The protein exists as the heavy chain of a heterodimer, covalently bound through di-sulfide bonds to one of several possible light chains. The encoded transporter plays a role in regulation of intracellular calcium levels and transports L-type amino acids. Alternatively spliced transcript variants, encoding different isoforms, have been characterized. [provided by RefSeq, Nov 2010]  
Chromosome 11
Location 11q13
Start 62856012  
End 62888883  
Strand +  
Gene Sequence

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Length 32872  
OMIM ID 158070   
HGNC ID HGNC:11026   
Unigene ID Hs.502769    
Ensembl ID ENSG00000168003   
PharmGKB ID -   

mRNA Information


mRNA ID NM_002394.5
Exon join(1..370,14734..14826,15566..15658,25008..25436, 25882..26055,26897..26988,28446..28514,28621..28679, 29166..29346,29454..29597,32124..32207,32320..32872)  
mRNA Sequence

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Length 2347  



CDS Information


   
Location join(259..370,14734..14826,15566..15658,25008..25436, 25882..26055,26897..26988,28446..28514,28621..28679, 29166..29346,29454..29597,32124..32207,32320..32682)
CDS Sequence

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CCDS ID CCDS8039.2



Protein Information


      
Protein IDNP_001012680.1
Protein NameSolute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
Molecular Wt. (Da)67970
Protein Sequence

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Length 631  
Uniprot IDQ07973
Ensembl Protein ID ENSP00000216862  



Post-translational Modification Information (Source : HPRD)


Residue Type site
NGlycosylation396
NGlycosylation412
NGlycosylation455
NGlycosylation537
NGlycosylation366
NGlycosylation334
NGlycosylation303
NGlycosylation264
NGlycosylation382
NGlycosylation350
NGlycosylation319
NGlycosylation280
NGlycosylation425
NGlycosylation393
NGlycosylation362
NGlycosylation323
NGlycosylation507
NGlycosylation475
NGlycosylation444
NGlycosylation405
CDisulfide Bridge241;462
CDisulfide Bridge211;432
CDisulfide Bridge179;400
CDisulfide Bridge148;369
CDisulfide Bridge109;330
SPhosphorylation103;-
SPhosphorylation134;-
SPhosphorylation104;-
SPhosphorylation72;-
SPhosphorylation41;-
SPhosphorylation2;-
TPhosphorylation106;-
TPhosphorylation137;-
TPhosphorylation107;-
TPhosphorylation75;-
TPhosphorylation44;-
TPhosphorylation5;-
SPhosphorylation134;-
SPhosphorylation165;-
SPhosphorylation135;-
SPhosphorylation103;-
SPhosphorylation72;-
SPhosphorylation33;-
TPhosphorylation39
SPhosphorylation41
TPhosphorylation39
SPhosphorylation41
SAcetylation103
SAcetylation134
SAcetylation104
SAcetylation72
SAcetylation41
SAcetylation2
SPhosphorylation9
SPhosphorylation9
SPhosphorylation9
SPhosphorylation9
SPhosphorylation9
NGlycosylation365
NGlycosylation381
NGlycosylation424
NGlycosylation428
NGlycosylation459
NGlycosylation429
NGlycosylation397
NGlycosylation366
NGlycosylation327
NGlycosylation506
NGlycosylation395
NGlycosylation426
NGlycosylation396
NGlycosylation364
NGlycosylation333
NGlycosylation294
SPhosphorylation301
YPhosphorylation312
SPhosphorylation332
YPhosphorylation343
SPhosphorylation302
YPhosphorylation313
SPhosphorylation270
YPhosphorylation281
SPhosphorylation239
YPhosphorylation250
SPhosphorylation200
YPhosphorylation211
SPhosphorylation607
SPhosphorylation638
SPhosphorylation608
SPhosphorylation576
SPhosphorylation545
SPhosphorylation506

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
3688ITGB1628NP_391987.1in vitro;in vivo12181350   


Pathway Information


      
Pathway Name Pathway ID
Protein digestion and absorption hsa04974


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd11345207-536  AmyAc_SLC3A2
cl07893207-536  AmyAc_family superfamily
cd11331217-540  AmyAc_OligoGlu_like
cd11359218-539  AmyAc_SLC3A1
cd11329161-600  AmyAc_maltase-like
cd11316235-539  AmyAc_bac2_AmyA
cd00551225-468  AmyAc_family
cd11328218-542  AmyAc_maltase
cd11334218-530  AmyAc_TreS
cd11333233-526  AmyAc_SI_OligoGlu_DGase
cd11330217-541  AmyAc_OligoGlu
cd11338208-541  AmyAc_CMD
cd11348231-526  AmyAc_2
cd11339236-487  AmyAc_bac_CMD_like_2
cd11332218-319  AmyAc_OligoGlu_TS
smart00642235-318  Aamy
cd11313237-475  AmyAc_arch_bac_AmyA
cd11352230-319  AmyAc_5
cd11340236-319  AmyAc_bac_CMD_like_3
cd11337218-474  AmyAc_CMD_like
cd11320229-471  AmyAc_AmyMalt_CGTase_like
cd11354218-307  AmyAc_bac_CMD_like
cd11324238-311  AmyAc_Amylosucrase
cd11336225-318  AmyAc_MTSase
cd11350237-345  AmyAc_4
cd11344239-347  AmyAc_GlgE_like
cd11353241-318  AmyAc_euk_bac_CMD_like
cd11314276-371  AmyAc_arch_bac_plant_AmyA
pfam11941519-624  DUF3459
cl02706519-624  Alpha-amylase_C superfamily
cd11323236-309  AmyAc_AGS
COG0366237-596  AmyA
TIGR02456218-587  treS_nterm
pfam00128239-474  Alpha-amylase
TIGR02403218-570  trehalose_treC
PRK10933218-622  PRK10933
PRK10785239-611  PRK10785
PRK09505233-315  malS
COG3280223-337  TreY
TIGR02401223-318  trehalose_TreY
PRK14507223-318  PRK14507
PRK14511247-318  PRK14511
PRK14510232-316  PRK14510


Ontology Information


   
HPRD ID16031
Molecular ClassMembrane transport protein
Molecular FunctionTranscription regulator activity (GO:0030528)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO