Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| SLC3A2 | 6520 | Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2  | 11 | 4F2; CD98; MDU1; 4F2HC; 4T2HC; NACAE; CD98HC  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 17192196    | 2006 | Cell line : - Source : Biochain Institute, Inc. (Hayward, CA). Sample Type : CRC tumor and normal tissue, Blood sample No. of Sample : 10 matched-pairs primary colon tumor and adjascent tissue Stage : - | Microarray, Exon-centric array (GeneChip Human Exon 1.0 ST), RT-PCR. | Differential splicing | - | Transcripts for SLC3A2 are shifted to a higher molecular weight, indicating the inclusion of various combinations of exons 2, 3 and 4 in tumor samples that are much less prevalent in normal tissue. |
| 20522643    | 2010 | Cell line : HCT 116 Source : Jackson Laboratory Sample Type : Mouse model No. of Sample : - Stage : - | Polyamine transport assay in cells, Western blot analysis and Bicinchoninic acid (BCA) protein assay | Up-regulation | - | - |
| 22968445    | 2012 | Cell line : - Source : Department of Pathology of Wrocaw Medical University. Sample Type : CRC tumor and normal tissue, Blood sample No. of Sample : 63 CRC patient samples Stage : - | Laser capture microdissection,FFPE-FASP,SAX fractionation,LC-MSMS,Label-free quantitation. | Up-regulation | 7.3 | - |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | Solute carriers |
| Description | This gene is a member of the solute carrier family and encodes a cell surface, transmembrane protein. The protein exists as the heavy chain of a heterodimer, covalently bound through di-sulfide bonds to one of several possible light chains. The encoded transporter plays a role in regulation of intracellular calcium levels and transports L-type amino acids. Alternatively spliced transcript variants, encoding different isoforms, have been characterized. [provided by RefSeq, Nov 2010]   | Chromosome | 11 |
| Location | 11q13 |
| Start | 62856012   |
| End | 62888883   |
| Strand | +   |
| Gene Sequence |    Download   Select all |
| Length | 32872   |
| OMIM ID | 158070    |
| HGNC ID | HGNC:11026    |
| Unigene ID | Hs.502769     |
| Ensembl ID | ENSG00000168003    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_002394.5 |
|---|---|
| Exon | join(1..370,14734..14826,15566..15658,25008..25436, 25882..26055,26897..26988,28446..28514,28621..28679, 29166..29346,29454..29597,32124..32207,32320..32872)   | mRNA Sequence |    Download   Select all |
| Length | 2347   |
CDS Information
| Location | join(259..370,14734..14826,15566..15658,25008..25436, 25882..26055,26897..26988,28446..28514,28621..28679, 29166..29346,29454..29597,32124..32207,32320..32682) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS8039.2 |    
Protein Information
| Protein ID | NP_001012680.1 |
|---|---|
| Protein Name | Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 |
| Molecular Wt. (Da) | 67970 |
| Protein Sequence |    Download   Select all |
| Length | 631   |
| Uniprot ID | Q07973 |    
| Ensembl Protein ID | ENSP00000216862   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| N | Glycosylation | 396 |
| N | Glycosylation | 412 |
| N | Glycosylation | 455 |
| N | Glycosylation | 537 |
| N | Glycosylation | 366 |
| N | Glycosylation | 334 |
| N | Glycosylation | 303 |
| N | Glycosylation | 264 |
| N | Glycosylation | 382 |
| N | Glycosylation | 350 |
| N | Glycosylation | 319 |
| N | Glycosylation | 280 |
| N | Glycosylation | 425 |
| N | Glycosylation | 393 |
| N | Glycosylation | 362 |
| N | Glycosylation | 323 |
| N | Glycosylation | 507 |
| N | Glycosylation | 475 |
| N | Glycosylation | 444 |
| N | Glycosylation | 405 |
| C | Disulfide Bridge | 241;462 |
| C | Disulfide Bridge | 211;432 |
| C | Disulfide Bridge | 179;400 |
| C | Disulfide Bridge | 148;369 |
| C | Disulfide Bridge | 109;330 |
| S | Phosphorylation | 103;- |
| S | Phosphorylation | 134;- |
| S | Phosphorylation | 104;- |
| S | Phosphorylation | 72;- |
| S | Phosphorylation | 41;- |
| S | Phosphorylation | 2;- |
| T | Phosphorylation | 106;- |
| T | Phosphorylation | 137;- |
| T | Phosphorylation | 107;- |
| T | Phosphorylation | 75;- |
| T | Phosphorylation | 44;- |
| T | Phosphorylation | 5;- |
| S | Phosphorylation | 134;- |
| S | Phosphorylation | 165;- |
| S | Phosphorylation | 135;- |
| S | Phosphorylation | 103;- |
| S | Phosphorylation | 72;- |
| S | Phosphorylation | 33;- |
| T | Phosphorylation | 39 |
| S | Phosphorylation | 41 |
| T | Phosphorylation | 39 |
| S | Phosphorylation | 41 |
| S | Acetylation | 103 |
| S | Acetylation | 134 |
| S | Acetylation | 104 |
| S | Acetylation | 72 |
| S | Acetylation | 41 |
| S | Acetylation | 2 |
| S | Phosphorylation | 9 |
| S | Phosphorylation | 9 |
| S | Phosphorylation | 9 |
| S | Phosphorylation | 9 |
| S | Phosphorylation | 9 |
| N | Glycosylation | 365 |
| N | Glycosylation | 381 |
| N | Glycosylation | 424 |
| N | Glycosylation | 428 |
| N | Glycosylation | 459 |
| N | Glycosylation | 429 |
| N | Glycosylation | 397 |
| N | Glycosylation | 366 |
| N | Glycosylation | 327 |
| N | Glycosylation | 506 |
| N | Glycosylation | 395 |
| N | Glycosylation | 426 |
| N | Glycosylation | 396 |
| N | Glycosylation | 364 |
| N | Glycosylation | 333 |
| N | Glycosylation | 294 |
| S | Phosphorylation | 301 |
| Y | Phosphorylation | 312 |
| S | Phosphorylation | 332 |
| Y | Phosphorylation | 343 |
| S | Phosphorylation | 302 |
| Y | Phosphorylation | 313 |
| S | Phosphorylation | 270 |
| Y | Phosphorylation | 281 |
| S | Phosphorylation | 239 |
| Y | Phosphorylation | 250 |
| S | Phosphorylation | 200 |
| Y | Phosphorylation | 211 |
| S | Phosphorylation | 607 |
| S | Phosphorylation | 638 |
| S | Phosphorylation | 608 |
| S | Phosphorylation | 576 |
| S | Phosphorylation | 545 |
| S | Phosphorylation | 506 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 3688 |    ITGB1 |    628 |    NP_391987.1 |    in vitro;in vivo |    12181350    |
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| Protein digestion and absorption |    hsa04974 |    
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd11345 | 207-536  | AmyAc_SLC3A2 |
| cl07893 | 207-536  | AmyAc_family superfamily |
| cd11331 | 217-540  | AmyAc_OligoGlu_like |
| cd11359 | 218-539  | AmyAc_SLC3A1 |
| cd11329 | 161-600  | AmyAc_maltase-like |
| cd11316 | 235-539  | AmyAc_bac2_AmyA |
| cd00551 | 225-468  | AmyAc_family |
| cd11328 | 218-542  | AmyAc_maltase |
| cd11334 | 218-530  | AmyAc_TreS |
| cd11333 | 233-526  | AmyAc_SI_OligoGlu_DGase |
| cd11330 | 217-541  | AmyAc_OligoGlu |
| cd11338 | 208-541  | AmyAc_CMD |
| cd11348 | 231-526  | AmyAc_2 |
| cd11339 | 236-487  | AmyAc_bac_CMD_like_2 |
| cd11332 | 218-319  | AmyAc_OligoGlu_TS |
| smart00642 | 235-318  | Aamy |
| cd11313 | 237-475  | AmyAc_arch_bac_AmyA |
| cd11352 | 230-319  | AmyAc_5 |
| cd11340 | 236-319  | AmyAc_bac_CMD_like_3 |
| cd11337 | 218-474  | AmyAc_CMD_like |
| cd11320 | 229-471  | AmyAc_AmyMalt_CGTase_like |
| cd11354 | 218-307  | AmyAc_bac_CMD_like |
| cd11324 | 238-311  | AmyAc_Amylosucrase |
| cd11336 | 225-318  | AmyAc_MTSase |
| cd11350 | 237-345  | AmyAc_4 |
| cd11344 | 239-347  | AmyAc_GlgE_like |
| cd11353 | 241-318  | AmyAc_euk_bac_CMD_like |
| cd11314 | 276-371  | AmyAc_arch_bac_plant_AmyA |
| pfam11941 | 519-624  | DUF3459 |
| cl02706 | 519-624  | Alpha-amylase_C superfamily |
| cd11323 | 236-309  | AmyAc_AGS |
| COG0366 | 237-596  | AmyA |
| TIGR02456 | 218-587  | treS_nterm |
| pfam00128 | 239-474  | Alpha-amylase |
| TIGR02403 | 218-570  | trehalose_treC |
| PRK10933 | 218-622  | PRK10933 |
| PRK10785 | 239-611  | PRK10785 |
| PRK09505 | 233-315  | malS |
| COG3280 | 223-337  | TreY |
| TIGR02401 | 223-318  | trehalose_TreY |
| PRK14507 | 223-318  | PRK14507 |
| PRK14511 | 247-318  | PRK14511 |
| PRK14510 | 232-316  | PRK14510 |
Ontology Information
| HPRD ID | 16031 |    
|---|---|
| Molecular Class | Membrane transport protein |
| Molecular Function | Transcription regulator activity (GO:0030528) |
| Biological Process | Regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
