Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| SMO | 6608 | Smoothened homolog (Drosophila)  | 7 | Gx; SMOH; FZD11  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 17683069    | 2007 | Cell line : Colo 320, HCT 116, Smo, Colo 205, HT 29 and WiDr,Colo 205, Colo 320, Caco 2, SW 480,293 T Source : ATCC Sample Type : - No. of Sample : - Stage : - | RT-PCR, Western blotting , Transfection experiments. | Down-regulation | - | - |
| 15072830    | 2004 | Cell line : - Source : - Sample Type : - No. of Sample : - Stage : - | - | Methylation | - | Expression of wild-type SMO is required for expression of GLI3 by a mechanism that is independent of conventional Hedgehog signalling. |
| 21438024    | 2011 | Cell line : - Source : - Sample Type : CRC tumor and normal tissue No. of Sample : 77 CRC patient Stage : - | Promoter microarrays, real time RT-PCR, Methylation Specific PCR | Methylation | - | The frequency of their promoter methylation was assessed in the larger group of patients (n = 77): KCNK12, GPR101, BARX1, CNTFR , SYT6, SMO (21%), EPHA5, and GSPT2. |
| 22901214    | 2012 | Cell line : - Source : Department of Gastroenterological Surgery of this hospital. Sample Type : CRC tumor and normal tissue No. of Sample : 43 cancer tissue and adjascent tissue sample Stage : - | real time RT-PCR, Immunohistochemistry | Up-regulation | - | Positive rates and intensities of mRNA and protein expression of Hh signaling pathway related genes SHH, SMO, GLI1 were found to be significantly increased in CRC tissues. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | GPCR / Class F : Frizzled receptors |
| Description | The protein encoded by this gene is a G protein-coupled receptor that interacts with the patched protein, a receptor for hedgehog proteins. The encoded protein tranduces signals to other proteins after activation by a hedgehog protein/patched protein complex. [provided by RefSeq, Jul 2010]   |
| Chromosome | 7 |
| Location | 7q32.3 |
| Start | 129188872   |
| End | 129213546   |
| Strand | +   |
| Gene Sequence |    Download   Select all |
| Length | 24675   |
| OMIM ID | 601500    |
| HGNC ID | HGNC:11119    |
| Unigene ID | Hs.437846     |
| Ensembl ID | ENSG00000128602    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_005631.4 |
|---|---|
| Exon | join(1..611,14513..14718,16332..16541,16739..16911, 17279..17498,17593..17716,19888..19980,20418..20526, 21492..21677,22094..22242,22765..22899,23153..24674)   | mRNA Sequence |    Download   Select all |
| Length | 3772   |
CDS Information
| Location | join(281..611,14513..14718,16332..16541,16739..16911, 17279..17498,17593..17716,19888..19980,20418..20526, 21492..21677,22094..22242,22765..22899,23153..23580) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS5811.1 |    
Protein Information
| Protein ID | NP_005622.1 |
|---|---|
| Protein Name | Smoothened homolog (Drosophila) |
| Molecular Wt. (Da) | 83322 |
| Protein Sequence |    Download   Select all |
| Length | 787   |
| Uniprot ID | O15528 |    
| Ensembl Protein ID | ENSP00000228606   |    
Post-translational Modification Information (Source : HPRD)
No matching records could be found.
Enzyme Information
| EC | 1.5.3.16 |    
|---|---|
| Name | spermine oxidase PAOh1/SMO PAOh1 (ambiguous) AtPAO1 AtPAO4 SMO mSMO SMO(PAOh1) SMO/PAOh1 SMO5 mSMOmu |
| Class | Oxidoreductases; Acting on the CH-NH group of donors; With oxygen as acceptor |
| Sysname | spermidine:oxygen oxidoreductase (spermidine-forming)   |
| Substrate | spermine [CPD:C00750]; O2 [CPD:C00007]; H2O   |
| Product | spermidine [CPD:C00315]; 3-aminopropanal [CPD:C05665]; H2O2   |
| Reaction (IUBMB) | ![]() |
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 5727 |    PTCH1 |    3200 |    NP_000255.2 |    in vivo |    9811851    |
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| Basal cell carcinoma |    hsa05217 |    
| Hedgehog signaling pathway |    hsa04340 |    
| Pathways in cancer |    hsa05200 |    
| Proteoglycans in cancer |    hsa05205 |    
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd07451 | 66-196  | CRD_SMO |
| cl02447 | 66-196  | CRD_FZ superfamily |
| pfam01534 | 220-554  | Frizzled |
| cl21587 | 220-554  | 7tm_2 superfamily |
| smart00063 | 70-181  | FRI |
| pfam01392 | 70-180  | Fz |
| cd07066 | 70-181  | CRD_FZ |
| cd07449 | 70-176  | CRD_FZ3 |
| cd07448 | 70-176  | CRD_FZ4 |
| cd07463 | 66-175  | CRD_FZ9 |
| cd07447 | 117-178  | CRD_Carboxypeptidase_Z |
| cd07461 | 117-176  | CRD_FZ8 |
| cd07444 | 95-175  | CRD_SFRP5 |
| cd07443 | 95-177  | CRD_SFRP1 |
| cd07456 | 70-181  | CRD_FZ5_like |
| cd07457 | 68-177  | CRD_FZ9_like |
| cd07442 | 66-169  | CRD_SFRP4 |
| cd07445 | 70-187  | CRD_corin_1 |
| cd07446 | 117-177  | CRD_SFRP2 |
| cd07458 | 118-176  | CRD_FZ1_like |
| cd07453 | 125-176  | CRD_crescent |
| cd07460 | 66-190  | CRD_FZ5 |
| cd07441 | 67-169  | CRD_SFRP3 |
| pfam00002 | 313-433  | 7tm_2 |
| cd07465 | 117-175  | CRD_FZ1 |
| cd07452 | 118-177  | CRD_sizzled |
| cd07466 | 117-189  | CRD_FZ7 |
Ontology Information
| HPRD ID | 2902 |    
|---|---|
| Molecular Class | Integral membrane protein |
| Molecular Function | Protein serine/threonine kinase activity (GO:0004674) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    

