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General Information
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 24532795    | 2014 | Cell line : - Source : Nanfang Hospital in China Sample Type : CRC tumor and normal tissue No. of Sample : - Stage : - | RT-PCR, Chromatin immunoprecepetation | Up-regulation | - | TDG warrants consideration as a potential biomarker for CRC and as a target for CRC treatment. In CRC patients, TDG levels were significantly higher in tumor tissues than in the adjacent normal tissues. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | |
| Description | The protein encoded by this gene belongs to the TDG/mug DNA glycosylase family. Thymine-DNA glycosylase (TDG) removes thymine moieties from G/T mismatches by hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of DNA and the mispaired thymine. With lower activity, this enzyme also removes thymine from C/T and T/T mispairings. TDG can also remove uracil and 5-bromouracil from mispairings with guanine. This enzyme plays a central role in cellular defense against genetic mutation caused by the spontaneous deamination of 5-methylcytosine and cytosine. This gene may have a pseudogene in the p arm of chromosome 12.   |
| Chromosome | 12 |
| Location | 12q24.1 |
| Start | 103965815   |
| End | 103988878   |
| Strand | +   |
| Gene Sequence |    Download   Select all |
| Length | 23064   |
| OMIM ID | 601423    |
| HGNC ID | HGNC:11700    |
| Unigene ID | Hs.584809    |
| Ensembl ID | ENSG00000139372    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_003211.4 |
|---|---|
| Exon | join(1..246,11104..11246,14017..14258,15079..15148, 16985..17120,17322..17404,17481..17575,18935..19106, 19789..19914,21134..23064)   | mRNA Sequence |    Download   Select all |
| Length | 3251   |
CDS Information
| Location | join(224..246,11104..11246,14017..14258,15079..15148, 16985..17120,17322..17404,17481..17575,18935..19106, 19789..19914,21134..21276) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS9095.1 |    
Protein Information
| Protein ID | NP_003202.3 |
|---|---|
| Protein Name | thymine-DNA glycosylase |
| Molecular Wt. (Da) | 45922 |
| Protein Sequence |    Download   Select all |
| Length | 410   |
| Uniprot ID | P05019 |    
| Ensembl Protein ID | ENSP00000302665   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| K | Acetylation | 59 |
| K | Acetylation | 83 |
| K | Acetylation | 84 |
| K | Acetylation | 87 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 1387 |    CREBBP |    2534 |    NP_004371.2 |    in vitro;in vivo;yeast 2-hybrid |    11864601    |
| 2099 |    ESR1 |    589 |    NP_000116.2 |    in vitro;in vivo;yeast 2-hybrid |    12874288    |
| 3725 |    JUN |    1302 |    NP_002219.1 |    in vivo;yeast 2-hybrid |    1631061    |
| 4089 |    SMAD4 |    2995 |    NP_005350.1 |    yeast 2-hybrid |    15231748    |
| 5371 |    PML |    23 |    NP_150241.2 |    in vitro;in vivo |    15569683    |
| 6256 |    RXRA |    1577 |    NP_002948.1 |    in vitro;in vivo |    12874288    |
| 7080 |    NKX2-1 |    2798 |    NP_001073136.1 |    in vitro;yeast 2-hybrid |    11438542    |
| 7508 |    XPC |    2046 |    NP_004619.3 |    in vitro;yeast 2-hybrid |    12505994    |
| 7919 |    BAT1 |    805 |    NP_004631.1 |    yeast 2-hybrid |    14667819    |
| 79753 |    SNIP1 |    6999 |    NP_078976.2 |    yeast 2-hybrid |    15231748    |
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| Base excision repair |    hsa03410 |    
Structure Information
| PDB ID | 1WYW |
|---|---|
| Resolution | 2.1 |
| Method | X-RAY DIFFRACTION |
| Chains | A   |
| Molecule | G/T mismatch-specific thymine DNA glycosylase   |
| Model | View |
Domain Information
| ID | Location | Description |
|---|---|---|
| cd10028 | 124-294  | UDG_F2_MUG |
| cl00483 | 124-294  | UDG_like superfamily |
| TIGR00584 | 2-329  | mug |
| PRK10201 | 126-273  | PRK10201 |
| pfam03167 | 131-293  | UDG |
| COG3663 | 124-283  | Mug |
| smart00987 | 131-244  | UreE_C |
| smart00986 | 131-285  | UDG |
| cd09593 | 134-232  | UDG_like |
| TIGR04274 | 124-163  | hypoxanDNAglyco |
| COG0810 | Jun-81  | TonB |
Ontology Information
| HPRD ID | 928 |    
|---|---|
| Molecular Class | DNA repair protein |
| Molecular Function | Receptor activity (GO:0004872) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
