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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
CASP7 840 Caspase 7, apoptosis-related cysteine peptidase  10MCH3; CMH-1; LICE2; CASP-7; ICE-LAP3 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
11381362   2001Cell line : H T29 19A, HT 29 16E

Source : -

Sample Type : -

No. of Sample : -

Stage : -

Immunohistochemistry, Western blotting Down-regulation-Immunohistochemistry showed downregulation of caspase 7 (22 of 26 cases) in colonic cancer samples compared with normal mucosa on the same tissue section.

Caspase 7 deficiency thus appears as a new immunohistochemical marker of colonic neoplasia; its correction represents a potential basis for new therapies.

17848589   2007Cell line : -

Source : Tumor Bank Network established at the Centro Nacional de Investigaciones Oncol?gicas (CNIO).

Sample Type : -

No. of Sample : -

Stage : -

Antibody Microarrays,Protein Labeling and Microarray Assay,Tissue Microarray Design and ImmunohistocDown-regulation--

12970753   2003Cell line : -

Source : -

Sample Type : CRC tumor and Normal tissue

No. of Sample : 98 CRC and 50 GC

Stage : -

Mutation analysis by PCR.Mutation-We detected CASPASE-7 mutations in two of 98 colon carcinomas.

Iinactivating mutations of the CASPASE-7 gene might lead to the loss of its apoptotic function and contribute to the pathogenesis of some human solid cancers.

20567846   2010Cell line : -

Source : -

Sample Type : CRC tumo

No. of Sample : 377

Stage : -

Genotyping Polymorhpism-The RIPK1 and CASP7 polymorphisms can be considered as possible prognostic markers for survival after curative resection in patients with colorectal cancer.

The RIPK1 rs2272990 in a dominant model and the CASP7 rs2227310 in a recessive model of the minor allele were associated with survival in a log-rank test.

22500158   2012Cell line : -

Source : Kyungpook NationalUniversityHospital(Daegu,Korea).

Sample Type : -

No. of Sample : 218 colon cancer, 179 rectal cancer

Stage : TNM Stage I - IV

RT-PCR genotyping Polymorhpism-None of the 10 polymorphisms in the CASP genes investigated in this study was found to be an independent prognostic marker for Korean patients with curatively resected colorectal cancer. In a previousstudy by Yoo et al. [17],significant associations between the CASP7 rs2227310 andCASP9 rs4645981 polymorphisms and prognosis were found in 411Korean patientswith early stageNSCLC.

It remains to be elucidated whether or not the CASP7 rs2227310C?G polymorphism itself affects protein characteristics ,interactionsites, or protein solubility or stability,this polymorphism was associated with poor survival outcomes for patients suffering with NSCLC.


Gene Details



Chromosome: 10; NC_000010.10 (115438921..115490668)

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Gene Type protein coding
Gene Family Caspases
Description This gene encodes a member of the cysteine-aspartic acid protease (caspase) family. Sequential activation of caspases plays a central role in the execution-phase of cell apoptosis. Caspases exist as inactive proenzymes which undergo proteolytic processing at conserved aspartic residues to produce two subunits, large and small, that dimerize to form the active enzyme. The precursor of the encoded protein is cleaved by caspase 3 and 10, is activated upon cell death stimuli and induces apoptosis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, May 2012]  
Chromosome 10
Location 10q25
Start 113679162  
End 113730909  
Strand +  
Gene Sequence

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Length 51748  
OMIM ID 601761   
HGNC ID HGNC:1508   
Unigene ID Hs.9216    
Ensembl ID ENSG00000165806   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001267056.1
Exon join(1..188,18333..18442,41871..42007,42490..42618, 46201..46376,47144..47273,50150..51748)  
mRNA Sequence

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Length 2485  



CDS Information


   
Locationjoin(594..817,18333..18442,41840..42007,42490..42618, 46201..46376,47144..47273,50150..50379)
CDS Sequence

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CCDS ID CCDS73200.1



Protein Information


      
Protein IDNP_001253986.1
Protein NameCaspase 7, apoptosis-related cysteine peptidase
Molecular Wt. (Da)43597
Protein Sequence

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Length 388  
Uniprot IDP04083
Ensembl Protein ID ENSP00000257497  



Post-translational Modification Information (Source : HPRD)


Residue Type site
DProteolytic Cleavage56
DProteolytic Cleavage231
DProteolytic Cleavage198
DProteolytic Cleavage23
DProteolytic Cleavage23
DProteolytic Cleavage198
DProteolytic Cleavage23
SPhosphorylation49
SPhosphorylation16
SPhosphorylation16
SPhosphorylation16

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
329BIRC23419NP_001157.1in vitro938   457   111   084   335   
330BIRC33426NP_001156.1in vitro9384571   
331XIAP2094NP_001158.2in vitro;in vivo923   044   211   359   776   000   000   000   000   000   
831CAST233NP_001741.4in vitro10731697   
835CASP22800NP_116764.2in vitro11399776   
998CDC42309NP_001782.1in vitro;in vivo11278572   
1511CTSG289NP_001902.1in vitro15650747   
1832DSP513NP_004406.2in vitro15500642   
2802GOLGA33990NP_005886.2in vitro;in vivo10791974   
3309HSPA5682NP_005338.1in vivo11943137   
4137MAPT1142NP_001116538.1in vitro;in vivo12888622   
4149MAX1113NP_002373.3in vitro;in vivo11535131   
4205MEF2A2807NP_005578.2in vitro11904443   
4209MEF2D2810NP_005911.1in vitro;in vivo11904443   
4734NEDD43786NP_940682.2in vitro;in vivo9593687   
5590PRKCZ1504NP_002735.3in vitro11016947   
5610EIF2AK21468NP_002750.1in vitro;in vivo11555640   
5663PSEN187NP_000012.1in vitro;in vivo10069390   
5664PSEN22860NP_000438.2in vivo9   990   034   921   969   510   000   000   
5757PTMA1778NP_001092755.1in vitro10675528   
5879RAC13627NP_061485.1in vitro11278572   
5885RAD215924NP_006256.1in vitro11875078   
5888RAD511557NP_597994.3in vitro109   980   589   607   320   
5921RASA1745NP_002881.1in vitro10200531   
5925RB11574NP_000312.2in vitro1   573   570   111   420   700   
6722SRF2788NP_003122.1in vitro11387340   
7132TNFRSF1A1861NP_001056.1in vitro11755217   
7431VIM1899NP_003371.2in vitro104   691   731   142   390   000   000   000   
8428STK2410385NP_003567.2in vitro;in vivo12107159   
8837CFLAR4671NP_003870.4in vitro;in vivo9228018   
10197PSME35500NP_789839.1in vitro11859414   
10277UBE4B11659AAD02233.1in vitro11802788   
11168PSIP14688NP_150091.2in vitro12181742   
63967CLSPN9257NP_071394.2in vitro16123041   


Pathway Information


                                    
Pathway Name Pathway ID
Alzheimer's disease hsa05010
Apoptosis hsa04210
Legionellosis hsa05134
Non-alcoholic fatty liver disease (NAFLD) hsa04932
Pertussis hsa05133
TNF signaling pathway hsa04668


Structure Information


PDB ID1F1J
Resolution2.35
MethodX-RAY DIFFRACTION
Chains A,B  
Molecule CASPASE-7 PROTEASE  
Model View



Domain Information




ID Location Description
cd0003260-301  CASc
cl0004260-301  CASc superfamily
smart0011560-302  CASc
pfam0065668-301  Peptidase_C14


Ontology Information


   
HPRD ID1060
Molecular ClassCysteine protease
Molecular FunctionCalcium ion binding (GO:0005509)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO