Search results:
General Information
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 21887554    | 2011 | Cell line : - Source : Departments of Pathology from Linkping University Hospital, Linkping, and Vrinnevi Hospital, Norrkping, Sweden Sample Type : - No. of Sample : normal colorectal mucosa and primary and lymph node metastatic tumors from 164 patients with primary colorectal adenocarcinomas Stage : TNM Stage I-IV | Immunohistochemistry | Up-regulation | - | Expression of SPARCL1 protein might be a valuable biomarker for early diagnosis in colorectal cancers and further predicting patients' prognosis. SPARCL1 was negative in the distant normal colorectal mucosa, weakly expressed in the adjacent normal mucosa, strongly expressed in primary colorectal adenocarcinomas and slightly expressed in their lymph node metastases. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | EF-hand domain containing |
| Description | -   |
| Chromosome | 4 |
| Location | 4q22-q25 |
| Start | 87473330   |
| End | 87529503   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 56174   |
| OMIM ID | 606041    |
| HGNC ID | HGNC:11220    |
| Unigene ID | Hs.62886    |
| Ensembl ID | ENSG00000152583    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_004684.5 |
|---|---|
| Exon | join(1..459,29919..29983,34377..34523,34906..35922, 37814..37886,38626..38744,39111..39231,46944..47080, 48984..49132,49926..50074,55701..56174)   | mRNA Sequence |    Download   Select all |
| Length | 3012   |
CDS Information
| Location | join(29930..29983,34377..34523,34906..35922,37814..37886, 38626..38744,39111..39231,46944..47080,48984..49132, 49926..50074,55701..55729) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS3622.1 |    
Protein Information
| Protein ID | NP_001121782.1 |
|---|---|
| Protein Name | SPARC-like 1 (hevin) |
| Molecular Wt. (Da) | 73569 |
| Protein Sequence |    Download   Select all |
| Length | 664   |
| Uniprot ID | P40933 |    
| Ensembl Protein ID | ENSP00000296545   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| S | Phosphorylation | 295 |
| S | Phosphorylation | 84 |
| S | Phosphorylation | 91 |
| S | Phosphorylation | 92 |
| S | Phosphorylation | 198 |
| S | Phosphorylation | 272 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 5621 |    PRNP |    1453 |    NP_000302.1 |    in vivo |    15146195    |
Pathway Information
No matching records could be found.
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd00252 | 514-662  | SPARC_EC |
| cl22905 | 514-662  | SPARC_EC superfamily |
| pfam10591 | 513-650  | SPARC_Ca_bdg |
| cd01328 | 433-512  | FSL_SPARC |
| cl00097 | 433-512  | KAZAL_FS superfamily |
| pfam00050 | 456-509  | Kazal_1 |
| smart00280 | 455-509  | KAZAL |
| pfam07648 | 465-509  | Kazal_2 |
| cd00104 | 462-509  | KAZAL_FS |
| pfam09289 | 433-454  | FOLN |
| cl23022 | 433-454  | FOLN superfamily |
| smart00274 | 432-455  | FOLN |
| cl23052 | 432-455  | FOLN superfamily |
| cd01327 | 462-485  | KAZAL_PSTI |
| pfam07423 | 232-299  | DUF1510 |
| cl22487 | 232-299  | DUF1510 superfamily |
| COG5271 | 23-400  | MDN1 |
| PRK08581 | 1-297  | PRK08581 |
Ontology Information
| HPRD ID | 4396 |    
|---|---|
| Molecular Class | Secreted polypeptide |
| Molecular Function | Cytokine activity (GO:0005125) |
| Biological Process | Immune response (GO:0006955)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
