Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| LTBP4 | 8425 | Latent transforming growth factor beta binding protein 4  | 19 | ARCL1C; LTBP-4; LTBP4L; LTBP4S  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 20089989    | 2010 | Cell line : - Source : VU University Medical Center, Amsterdam, The Netherlands. Sample Type : CRC tumor and normal tissue No. of Sample : - Stage : - | Biochemical isolation to nano-LC-MS/MS analysis | Up-regulation | - | This genes are differenitially expressed between colorectal adenoma and Colorectal cancer tissue. CRC tissue was collected at the VU University Medical Center, Amsterdam, The Netherlands. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | Latent transforming growth factor, beta binding proteins |
| Description | The protein encoded by this gene binds transforming growth factor beta (TGFB) as it is secreted and targeted to the extracellular matrix. TGFB is biologically latent after secretion and insertion into the extracellular matrix, and sheds TGFB and other proteins upon activation. Defects in this gene may be a cause of cutis laxa and severe pulmonary, gastrointestinal, and urinary abnormalities. Three transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, May 2010]   |
| Chromosome | 19 |
| Location | 19q13.1-q1 |
| Start | 40592888   |
| End | 40629820   |
| Strand | +   |
| Gene Sequence |    Download   Select all |
| Length | 36933   |
| OMIM ID | 604710    |
| HGNC ID | HGNC:6717    |
| Unigene ID | Hs.466766     |
| Ensembl ID | ENSG00000090006    |
| PharmGKB ID | PA30480    |
mRNA Information
| mRNA ID | XM_011527387.1 |
|---|---|
| Exon | join(1..294,6310..6368,6534..6669,7181..7290,12148..12339, 12518..12765,12842..12944,13346..13420,13517..13639, 14478..14642,15333..15482,15597..15716,16643..16774, 16859..16984,17645..17770,18265..18507,18972..19097, 19186..19305,20178..20309,20517..20642,21029..21151, 21428..21559,24002..24133,24213..24338,26460..26606, 29514..29780,30063..30134,30717..30845,31049..31195, 32970..33122,34088..34468,34818..34970,36509..36931)   | mRNA Sequence |    Download   Select all |
| Length | 5291   |
CDS Information
| Location | join(279..294,6310..6368,6515..6669,7181..7290, 12148..12339,12518..12765,12842..12944,13346..13420, 13517..13639,14478..14642,15333..15482,15597..15716, 16643..16774,16859..16984,17645..17770,18265..18507, 18972..19097,19186..19305,20178..20309,20517..20642, 21029..21151,21428..21559,24002..24133,24213..24338, 26460..26606,29514..29780,30063..30134,30717..30845, |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS74368.1 |    
Protein Information
| Protein ID | NP_001036009.1 |
|---|---|
| Protein Name | Latent transforming growth factor beta binding protein 4 |
| Molecular Wt. (Da) | 170635 |
| Protein Sequence |    Download   Select all |
| Length | 1624   |
| Uniprot ID | Q9H8V3 |    
| Ensembl Protein ID | ENSP00000232458   |    
Post-translational Modification Information (Source : HPRD)
No matching records could be found.
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 7040 |    TGFB1 |    1821 |    NP_000651.3 |    in vivo |    9660815    |
Pathway Information
No matching records could be found.
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd00054 | 834-867  | EGF_CA |
| cl21504 | 834-867  | EGF_CA superfamily |
| cd00054 | 1049-1084  | EGF_CA |
| cl21504 | 1049-1084  | EGF_CA superfamily |
| cd00054 | 878-910  | EGF_CA |
| cl21504 | 878-910  | EGF_CA superfamily |
| cd00054 | 671-708  | EGF_CA |
| cl21504 | 671-708  | EGF_CA superfamily |
| cd00054 | 920-951  | EGF_CA |
| cl21504 | 920-951  | EGF_CA superfamily |
| cd00054 | 357-391  | EGF_CA |
| cl21504 | 357-391  | EGF_CA superfamily |
| cd00054 | 752-787  | EGF_CA |
| cl21504 | 752-787  | EGF_CA superfamily |
| cd00054 | 710-744  | EGF_CA |
| cl21504 | 710-744  | EGF_CA superfamily |
| cd00054 | 1296-1325  | EGF_CA |
| cl21504 | 1296-1325  | EGF_CA superfamily |
| cd00054 | 587-619  | EGF_CA |
| cl21504 | 587-619  | EGF_CA superfamily |
| cd00054 | 629-670  | EGF_CA |
| cl21504 | 629-670  | EGF_CA superfamily |
| cd00054 | 1574-1612  | EGF_CA |
| cl21504 | 1574-1612  | EGF_CA superfamily |
| smart00179 | 878-914  | EGF_CA |
| smart00179 | 834-867  | EGF_CA |
| smart00179 | 1049-1090  | EGF_CA |
| smart00179 | 920-955  | EGF_CA |
| pfam00683 | 418-458  | TB |
| cl02926 | 418-458  | TB superfamily |
| smart00179 | 357-387  | EGF_CA |
| pfam00683 | 1360-1401  | TB |
| cl02926 | 1360-1401  | TB superfamily |
| pfam07645 | 834-868  | EGF_CA |
| smart00179 | 671-708  | EGF_CA |
| smart00179 | 752-793  | EGF_CA |
| pfam07645 | 752-792  | EGF_CA |
| pfam00683 | 1193-1234  | TB |
| cl02926 | 1193-1234  | TB superfamily |
| smart00179 | 587-623  | EGF_CA |
| smart00179 | 629-670  | EGF_CA |
| pfam07645 | 878-918  | EGF_CA |
| pfam12662 | 1071-1094  | cEGF |
| pfam12662 | 567-590  | cEGF |
| cl21504 | 567-590  | EGF_CA superfamily |
| smart00179 | 710-744  | EGF_CA |
| pfam07645 | 1049-1089  | EGF_CA |
| pfam07645 | 920-959  | EGF_CA |
| smart00181 | 360-392  | EGF |
| pfam12947 | 1059-1089  | EGF_3 |
| smart00179 | 1296-1325  | EGF_CA |
| smart00179 | 1574-1608  | EGF_CA |
| pfam07645 | 710-750  | EGF_CA |
| pfam12947 | 838-866  | EGF_3 |
| smart00179 | 961-999  | EGF_CA |
| cl21504 | 961-999  | EGF_CA superfamily |
| smart00179 | 1005-1048  | EGF_CA |
| cl21504 | 1005-1048  | EGF_CA superfamily |
| pfam12662 | 651-674  | cEGF |
Ontology Information
| HPRD ID | 570 |    
|---|---|
| Molecular Class | Extracellular matrix protein |
| Molecular Function | Peptide hormone (GO:0005180) |
| Biological Process | Cell development (GO:0048468)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
