Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| HOMER2 | 9455 | homer scaffolding protein 2  | 15 | CPD; ACPD; DFNA68; VESL-2; HOMER-2  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 21636702    | 2011 | Cell line : - Source : - Sample Type : CRC tumor No. of Sample : - Stage : Duke Stage A-D | Methylated CpG island amplification coupled with microarray analysis,Methylation-specific PCR ,Real-time quantitative MSP | Methylation | - | - |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | Homer scaffolding proteins |
| Description | This gene encodes a member of the homer family of dendritic proteins. Members of this family regulate group 1 metabotrophic glutamate receptor function. The encoded protein is a postsynaptic density scaffolding protein. Alternative splicing results in multiple transcript variants. Two related pseudogenes have been identified on chromosome 14. [provided by RefSeq, Jun 2011]   |
| Chromosome | 15 |
| Location | 15q24.3 |
| Start | 83517729   |
| End | 83654905   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 137177   |
| OMIM ID | 604799    |
| HGNC ID | HGNC:17513    |
| Unigene ID | Hs.578443    |
| Ensembl ID | ENSG00000103942    |
| PharmGKB ID | PA134870500    |
mRNA Information
| mRNA ID | ?NM_004839.3 |
|---|---|
| Exon |   | mRNA Sequence |    Download   Select all |
| Length |   |
CDS Information
| Location | |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS45334.1 |    
Protein Information
| Protein ID | NP_004830.2 |
|---|---|
| Protein Name | homer scaffolding protein 2 |
| Molecular Wt. (Da) | 0 |
| Protein Sequence |    Download   Select all |
| Length | 354   |
| Uniprot ID | Q96PU5 |    
| Ensembl Protein ID | ENSP00000256830   |    
Post-translational Modification Information (Source : HPRD)
No matching records could be found.
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 1627 |    DBN1 |    545 |    NP_543157.1 |    in vivo |    12676529    |
| 2911 |    GRM1 |    5129 |    NP_000829.2 |    in vitro |    9808458    |
| 3708 |    ITPR1 |    925 |    Q14643 |    in vitro;in vivo |    9808459    |
| 6261 |    RYR1 |    1618 |    NP_000531.2 |    in vitro;in vivo |    12223488    |
| 116986 |    AGAP2 |    5687 |    NP_001116244.1 |    in vitro;in vivo |    14528310    |
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| FoxO signaling pathway |    hsa04068 |    
| Glutamatergic synapse |    hsa04724 |    
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd01206 | 3-111  | EVH1_Homer_Vesl |
| cl17171 | 3-111  | PH-like superfamily |
| cd00837 | 5-107  | EVH1_family |
| pfam00568 | 4-107  | WH1 |
| smart00461 | 1-105  | WH1 |
| cd01207 | 5-100  | EVH1_Ena_VASP-like |
| pfam12325 | 177-308  | TMF_TATA_bd |
| cl22438 | 177-308  | TMF_TATA_bd superfamily |
| pfam08232 | 221-303  | Striatin |
| cl07022 | 221-303  | Striatin superfamily |
| pfam04124 | 177-315  | Dor1 |
| cl19297 | 177-315  | Dor1 superfamily |
| pfam14772 | 203-277  | NYD-SP28 |
| cl20695 | 203-277  | NYD-SP28 superfamily |
| pfam03961 | 185-277  | DUF342 |
| cl19219 | 185-277  | DUF342 superfamily |
| TIGR02168 | 93-333  | SMC_prok_B |
| TIGR02169 | 160-349  | SMC_prok_A |
| TIGR02168 | 163-327  | SMC_prok_B |
| TIGR02168 | 167-342  | SMC_prok_B |
| COG1196 | 163-350  | Smc |
| TIGR04211 | 217-313  | SH3_and_anchor |
| COG1196 | 162-331  | Smc |
| COG1196 | 162-349  | Smc |
| TIGR02169 | 162-320  | SMC_prok_A |
| TIGR02168 | 162-353  | SMC_prok_B |
| TIGR02169 | 186-351  | SMC_prok_A |
| COG1196 | 100-343  | Smc |
| TIGR02169 | 201-347  | SMC_prok_A |
| COG0419 | 162-341  | SbcC |
| TIGR02168 | 161-349  | SMC_prok_B |
| COG1196 | 186-340  | Smc |
| COG2433 | 208-275  | COG2433 |
| TIGR04211 | 186-275  | SH3_and_anchor |
| pfam12128 | 173-314  | DUF3584 |
| COG1196 | 91-346  | Smc |
| TIGR02168 | 93-350  | SMC_prok_B |
| pfam04156 | 231-340  | IncA |
| PRK02224 | 101-314  | PRK02224 |
| TIGR02169 | 192-344  | SMC_prok_A |
| pfam12128 | 93-340  | DUF3584 |
| COG1196 | 158-350  | Smc |
| COG1196 | 161-342  | Smc |
| COG1196 | 162-353  | Smc |
| pfam04111 | 208-322  | APG6 |
| pfam08317 | 225-328  | Spc7 |
| TIGR02168 | 93-314  | SMC_prok_B |
| TIGR02168 | 219-350  | SMC_prok_B |
| TIGR02169 | 241-340  | SMC_prok_A |
| PRK03918 | 184-350  | PRK03918 |
| PRK03918 | 217-323  | PRK03918 |
| TIGR04523 | 164-340  | Mplasa_alph_rch |
| PRK02224 | 162-349  | PRK02224 |
| TIGR04211 | 188-306  | SH3_and_anchor |
| PRK03918 | 211-323  | PRK03918 |
| PRK03918 | 181-314  | PRK03918 |
| pfam07888 | 180-344  | CALCOCO1 |
| COG1579 | 161-331  | COG1579 |
| pfam09726 | 124-316  | Macoilin |
| TIGR03346 | 224-297  | chaperone_ClpB |
| TIGR02169 | 197-354  | SMC_prok_A |
| PTZ00121 | 101-336  | PTZ00121 |
| PLN02939 | 164-326  | PLN02939 |
| PRK12704 | 229-333  | PRK12704 |
| TIGR04211 | 230-330  | SH3_and_anchor |
| TIGR02168 | 96-328  | SMC_prok_B |
| PRK03918 | 201-350  | PRK03918 |
| COG1196 | 242-350  | Smc |
| pfam10234 | 220-331  | Cluap1 |
| COG2433 | 219-326  | COG2433 |
| COG0419 | 92-354  | SbcC |
| COG1579 | 185-315  | COG1579 |
| COG2433 | 169-340  | COG2433 |
| COG1196 | 223-353  | Smc |
| PRK03918 | 224-316  | PRK03918 |
| TIGR00618 | 177-323  | sbcc |
| COG5185 | 203-340  | HEC1 |
| pfam09730 | 181-332  | BicD |
| pfam09730 | 230-322  | BicD |
| COG0419 | 94-333  | SbcC |
| COG0419 | 184-345  | SbcC |
| TIGR02169 | 101-334  | SMC_prok_A |
| pfam05483 | 149-328  | SCP-1 |
| PRK03918 | 229-336  | PRK03918 |
| COG0419 | 162-342  | SbcC |
| PRK03918 | 181-333  | PRK03918 |
| PRK01156 | 223-353  | PRK01156 |
| pfam03962 | 220-317  | Mnd1 |
| PRK01156 | 220-351  | PRK01156 |
| pfam04156 | 201-315  | IncA |
| PRK02224 | 224-349  | PRK02224 |
| pfam15066 | 166-314  | CAGE1 |
| PRK03918 | 221-351  | PRK03918 |
| PRK05431 | 225-330  | PRK05431 |
| pfam10186 | 219-330  | Atg14 |
| PRK03918 | 162-314  | PRK03918 |
| pfam13949 | 188-322  | ALIX_LYPXL_bnd |
| pfam05557 | 93-349  | MAD |
| PRK00252 | 225-307  | alaS |
| pfam05667 | 229-292  | DUF812 |
| TIGR03319 | 231-314  | RNase_Y |
| TIGR01069 | 158-307  | mutS2 |
| TIGR01843 | 173-335  | type_I_hlyD |
| pfam05667 | 221-293  | DUF812 |
| TIGR04523 | 160-327  | Mplasa_alph_rch |
| pfam05911 | 189-313  | DUF869 |
| pfam05557 | 172-312  | MAD |
| PRK01156 | 205-314  | PRK01156 |
| PRK14844 | 250-348  | PRK14844 |
| TIGR02169 | 219-349  | SMC_prok_A |
| pfam12128 | 177-350  | DUF3584 |
| pfam10146 | 223-314  | zf-C4H2 |
| pfam07227 | 203-328  | DUF1423 |
| pfam11559 | 222-270  | ADIP |
| pfam01576 | 221-342  | Myosin_tail_1 |
| PRK11448 | 219-294  | hsdR |
| pfam05622 | 162-319  | HOOK |
| PRK03992 | 219-260  | PRK03992 |
Ontology Information
| HPRD ID | 9207 |    
|---|---|
| Molecular Class | Not Available |
| Molecular Function | Guanyl-nucleotide exchange factor activity (GO:0005085) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
