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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
CD74 972 CD74 molecule, major histocompatibility complex, class II invariant chain  5- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20614481   2010Cell line : CT26

Source : -

Sample Type : -

No. of Sample : -

Stage : -

real time RT-PCR, Western blotting, Flow cytometryUp-regulation-CD74 is expressed on CEC and colon carcinoma cells and serves as a survival receptor in these cells.


Gene Details



NC_000005.9 (149781200..149792543, complement)

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Gene Type protein coding
Gene Family CD molecules
Description The protein encoded by this gene associates with class II major histocompatibility complex (MHC) and is an important chaperone that regulates antigen presentation for immune response. It also serves as cell surface receptor for the cytokine macrophage migration inhibitory factor (MIF) which, when bound to the encoded protein, initiates survival pathways and cell proliferation. This protein also interacts with amyloid precursor protein (APP) and suppresses the production of amyloid beta (Abeta). Multiple alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Aug 2011]  
Chromosome 5
Location 5q32
Start 149781200  
End 149792543  
Strand -  
Gene Sequence

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Length 11344  
OMIM ID 142790   
HGNC ID HGNC:1697   
Unigene ID Hs.436568   
Ensembl ID ENSG00000019582   
PharmGKB ID PA26236   

mRNA Information


mRNA ID NM_001025158.2
Exon join(1..312,5613..5785,5977..6056,6616..6678,10312..10374, 10687..11300)  
mRNA Sequence

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Length 1322  



CDS Information


   
Location188..670
CDS Sequence

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CCDS ID CCDS34276.1



Protein Information


      
Protein IDNP_001020329.1
Protein NameCD74 molecule, major histocompatibility complex, class II invariant chain
Molecular Wt. (Da)18197
Protein Sequence

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Length 160  
Uniprot IDP25963
Ensembl Protein ID ENSP00000216797  



Post-translational Modification Information (Source : HPRD)


Residue Type site
NGlycosylation130
NGlycosylation136
SPhosphorylation25
SPhosphorylation42
CPalmitoylation44
SPhosphorylation45

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                         
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
960CD44115NP_000601.3in vivo8343954   
1514CTSL1293NP_001903.1in vitro10022822   
3113HLA-DPA1835NP_291032.2in vivo16242130   
3115HLA-DPB1832NP_002112.3in vivo16242130   
3117HLA-DQA16765NP_002113.2in vivo16242130   
3119HLA-DQB15054NP_002114.3in vivo16242130   
3122HLA-DRA833NP_061984.2in vivo16242130   


Pathway Information


                  
Pathway Name Pathway ID
Antigen processing and presentation hsa04612
Herpes simplex infection hsa05168
Tuberculosis hsa05152


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd00191212-271  TY
cl00150212-271  TY superfamily
pfam0930717-129  MHC2-interact
cl0780917-129  MHC2-interact superfamily
pfam08831136-207  MHCassoc_trimer
cl07439136-207  MHCassoc_trimer superfamily
pfam00086213-271  Thyroglobulin_1
smart00211230-273  TY


Ontology Information


   
HPRD ID8874
Molecular ClassMHC complex protein
Molecular FunctionGrowth factor activity (GO:0008083)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO