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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
CTNNB1 1499 Catenin (cadherin-associated protein), beta 1, 88kDa  3CTNNB; MRD19; armadillo 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22810696   2012Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and Normal tissue

No. of Sample : -

Stage : -

-Stabilization--

22894902   2012Cell line : -

Source : -

Sample Type : CRC tumor and Normal tissue

No. of Sample : 51 tumours, including 26 polypoid tumours and 25 ulcerative tumours

Stage : -

-Stabilization-B-catenin directly regulates the expression of the hTERT gene.

The majority of colorectal cancers (CRCs) are characterized by a dysregulated canonical Wnt-signaling pathway leading to the stabilization and subsequent cellular increase and accumulation of B-catenin.

23033009   2012Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

Immunostaining, immunoblotting, realtime RT-PCR, siRNA-mediated B-catenin knockdown .Unknown-B-catenin employs a two-pronged approach to inhibiting prostaglandin turnover during colorectal neoplasia by repressing PGT expression in addition to 15-PGDH.

B-catenin knockdown in vitro increases PGT expression in both colorectal adenoma- and carcinoma-derived cell lines, as does dnTCF4 induction in LS174T cells.

LS174T cells and B-catenin(-/lox)-villin-cre-ERT2 mouse tissue.

20089989   2010Cell line : LS174T

Source : -

Sample Type : Mouse tumor tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysis.Up-regulation-This genes are differenitially expressed between colorectal adenoma and Colorectal cancer tissue.

CRC tissue was collected at the VU University Medical Center, Amsterdam, The Netherlands.

11953860   2002Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

Immunohistochemistry, SSCPUp-regulation-A significant relationship of nuclear beta-catenin expression with ulcerative colorectal cancer was found.

Nuclear expression of beta-catenin was observed in 18 out of 25 (72%) cases of ulcerative colorectal cancer and seven out of 26 (26.9%) cases of polypoid colorectal cancer.

23216017   2013Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

ImmunohistochemistryUp-regulation-Lung microenvironment promotes nuclear localization of B-catenin, suggesting that the Wnt signaling pathway is relatively active highly in CRC metastasized to lung, when compared with liver or colon.

Nuclear localization of stable b-catenin occurs.

The human biopsies of adenocarcinomas in colon and CRC liver and lung metastases were analyzed.

16289386   2005Cell line : -

Source : -

Sample Type : CRC tumor and Normal tissue

No. of Sample : 231 colonic tissues including 97 adenocarcinomas, 85 adenomas and 49 non-neoplastic colons

Stage : TNM Stage I-III

-Up-regulation-A screening panel of CYP1B1 in combination with nuclear beta-catenin was the most suitable marker pair to screen for colorectal carcinoma based on this study.

Expressions of CYP1B1, p53, nuclear beta-catenin and bcl-2 were significantly associated with colorectal carcinogenesis (p<0.01 for the trend test). The overexpression rates for CYP1B1, p53, nuclear beta-catenin and bcl-2 were significantly higher in the adenoma and carcinoma groups than in the non-neoplastic colon group (p<0.05).


Gene Details



Chromosome: 3; NC_000003.11 (41240942..41281939)

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Gene Type protein coding
Gene Family Armadillo repeat containing
Description The protein encoded by this gene is part of a complex of proteins that constitute adherens junctions (AJs). AJs are necessary for the creation and maintenance of epithelial cell layers by regulating cell growth and adhesion between cells. The encoded protein also anchors the actin cytoskeleton and may be responsible for transmitting the contact inhibition signal that causes cells to stop dividing once the epithelial sheet is complete. Finally, this protein binds to the product of the APC gene, which is mutated in adenomatous polyposis of the colon. Mutations in this gene are a cause of colorectal cancer (CRC), pilomatrixoma (PTR), medulloblastoma (MDB), and ovarian cancer. Three transcript variants encoding the same protein have been found for this gene.[provided by RefSeq, Oct 2009]  
Chromosome 3
Location 3p21
Start 41199451  
End 41240448  
Strand +  
Gene Sequence

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Length 40998  
OMIM ID 116806   
HGNC ID HGNC:2514   
Unigene ID Hs.476018    
Ensembl ID ENSG00000168036   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001904.3
Exon join(1..220,24571..24631,25076..25303,25504..25757, 25884..26122,26210..26411,27758..27902,33891..33994, 34079..34417,34689..34847,36274..36393,36899..37049, 37138..37259,38566..38626,39684..40998)  
mRNA Sequence

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Length 3720  



CDS Information


   
Locationjoin(24619..24631,25076..25303,25504..25757,25884..26122, 26210..26411,27758..27902,33891..33994,34079..34417, 34689..34847,36274..36393,36899..37049,37138..37259, 40210..40296)
CDS Sequence

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CCDS ID -



Protein Information


      
Protein IDNP_001091679.1
Protein NameCatenin (cadherin-associated protein), beta 1, 88kDa
Molecular Wt. (Da)85366
Protein Sequence

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Length 781  
Uniprot IDP62745
Ensembl Protein ID ENSP00000272233  



Post-translational Modification Information (Source : HPRD)


Residue Type site
TPhosphorylation102
TPhosphorylation112
SPhosphorylation29
TPhosphorylation393
TPhosphorylation102
TPhosphorylation112
SPhosphorylation29
YPhosphorylation142
YPhosphorylation142
YPhosphorylation654
YPhosphorylation86
KAcetylation49
SPhosphorylation45
SPhosphorylation45
SPhosphorylation33
SPhosphorylation37
TPhosphorylation41
SPhosphorylation675
SPhosphorylation45
SPhosphorylation675;-
SPhosphorylation675;-
SPhosphorylation552;-
SPhosphorylation552;-
SPhosphorylation552;-
TPhosphorylation556
TPhosphorylation556
TPhosphorylation556
TPhosphorylation551
TPhosphorylation551
TPhosphorylation551
SPhosphorylation191
SPhosphorylation191
SPhosphorylation191
TPhosphorylation574
TPhosphorylation574
TPhosphorylation574

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                                                                                                                                                                                                                                                                                                                     
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
1000CDH2226NP_001783.2in vitro121   515   221   260   461   000   000   000   
1001CDH3227NP_001784.2in vivo1   188   907   282   272   140   000   000   000   000   000   
1013CDH15225NP_004924.1in vitro9545347   
1021CDK64533NP_001250.1in vitro;in vivo17208333   
1495CTNNA1285NP_001894.2in vitro770   641   491   109   939   000   000   
2033EP3004078NP_001420.2in vitro;in vivo15060161   
2308FOXO1645NP_002006.2yeast 2-hybrid15905404   
3091HIF1A4517NP_001521.1in vitro;in vivo17220880   
4092SMAD74241NP_005895.1in vivo15684397   
4233MET1280NP_001120972.1in vivo11929826   
4303FOXO42070NP_005929.2in vivo15905404   
4790NFKB11238NP_003989.2in vivo15829968   
5347PLK13652NP_005021.2in vitro19001871   
5494PPM1A16199NP_808821.2in vivo10644691   
5663PSEN187NP_000012.1in vitro;in vivo9   738   936   100   925   850   000   000   000   000   000   000   000   000   000   000   000   000   000   
5664PSEN22860NP_000438.2in vivo10037471   
6256RXRA1577NP_002948.1in vivo12771132   
6299SALL13742NP_002959.2in vivo15158448   
6656SOX13687NP_005977.2in vivo15110721   
7048TGFBR21823NP_001020018.1in vivo12000714   
9223MAGI14020NP_001028229.1in vitro;in vivo;yeast 2-hybrid10772923   
9372ZFYVE94782NP_004790.2yeast 2-hybrid15231748   
10856RUVBL216070NP_006657.1in vivo15829968   
30851TAX1BP318160NP_055419.1in vitro;in vivo;yeast 2-hybrid12874278   
57680CHD816712NP_065971.2in vitro11744694   
123169LEO111231NP_620147.1in vivo16630820   
283149BCL9L10612NP_872363.1in vivo;yeast 2-hybrid15574752   


Pathway Information


                                                                                                                              
Pathway Name Pathway ID
Adherens junction hsa04520
Arrhythmogenic right ventricular cardiomyopathy (ARVC) hsa05412
Bacterial invasion of epithelial cells hsa05100
Basal cell carcinoma hsa05217
Colorectal cancer hsa05210
Endometrial cancer hsa05213
Focal adhesion hsa04510
Hippo signaling pathway hsa04390
HTLV-I infection hsa05166
Leukocyte transendothelial migration hsa04670
Melanogenesis hsa04916
Pathogenic Escherichia coli infection hsa05130
Pathways in cancer hsa05200
Prostate cancer hsa05215
Proteoglycans in cancer hsa05205
Rap1 signaling pathway hsa04015
Signaling pathways regulating pluripotency of stem cells hsa04550
Thyroid cancer hsa05216
Thyroid hormone signaling pathway hsa04919
Tight junction hsa04530
Wnt signaling pathway hsa04310


Structure Information


PDB ID1G3J
Resolution2.1
MethodX-RAY DIFFRACTION
Chains A,C  
Molecule BETA-CATENIN ARMADILLO REPEAT REGION  
Model View



Domain Information




ID Location Description
cd00020399-518  ARM
cl22454399-518  ARM superfamily
cd00020229-348  ARM
cl22454229-348  ARM superfamily
cd00020484-623  ARM
cl22454484-623  ARM superfamily
cd00020108-222  ARM
cl22454108-222  ARM superfamily
cd00020589-668  ARM
cl22454589-668  ARM superfamily
cd00020195-305  ARM
cd00020318-428  ARM
cd00020525-664  ARM
cd00020356-473  ARM
smart00185350-390  ARM
cl22454350-390  ARM superfamily
pfam00514350-390  Arm
pfam00514583-622  Arm
smart00185230-262  ARM
pfam00514230-262  Arm
smart00185583-623  ARM
pfam00514431-473  Arm
smart00185431-473  ARM
COG5064142-431  SRP1


Ontology Information


   
HPRD ID1321
Molecular ClassAdhesion molecule
Molecular FunctionGTPase activity (GO:0003924)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
P35222DB03904UreaSmallMoleculeDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO