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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
ING3 54556 inhibitor of growth family, member 3  7p47ING3, FLJ20089, Eaf4, MEAF4 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
24927342   2014Cell line : Colo201, Colo205, DLD-1, HCT-15, HCT-116, HT-29, KM-12, SW480, SW620, WiDr

Source : Kouseiren Takaoka Hospital (Japan) and Affiliated Hospital, University of Toyama (Japan).

Sample Type : CRC tumor and normal tissue

No. of Sample : CRC tumor 319 and adjacent normal tissue 96

Stage : TNM Stage I-IV

Immunohistochemistry on tissue microarray,Western blotting, RT-PCRDown-regulation-Downregulated ING3 expression might play an important role in colorectal adenoma-adenocarcinoma sequence.


Gene Details



NC_000007.13 (120590817..120615711)

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Gene Type protein coding
Gene Family Zinc fingers, PHD-type
Description The protein encoded by this gene is similar to ING1, a tumor suppressor protein that can interact with TP53, inhibit cell growth, and induce apoptosis. This protein contains a PHD-finger, which is a common motif in proteins involved in chromatin remodeling. This gene can activate p53 trans-activated promoters, including promoters of p21/waf1 and bax. Overexpression of this gene has been shown to inhibit cell growth and induce apoptosis. Allelic loss and reduced expression of this gene were detected in head and neck cancers. Two alternatively spliced transcript variants encoding different isoforms have been observed. [provided by RefSeq, Jul 2008]  
Chromosome 7
Location 7q31
Start 120590817  
End 120615711  
Strand +  
Gene Sequence

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Length 24895  
OMIM ID 607493   
HGNC ID HGNC:14587   
Unigene ID Hs.489811   
Ensembl ID ENSG00000071243   
PharmGKB ID PA29875   

mRNA Information


mRNA ID ?NM_019071.2
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID CCDS35497.1



Protein Information


      
Protein IDNP_061944.2
Protein Nameinhibitor of growth family, member 3
Molecular Wt. (Da)0
Protein Sequence

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Length 418  
Uniprot IDQ9P2E7
Ensembl Protein ID ENSP00000264360  



Post-translational Modification Information (Source : HPRD)


Residue Type site
KAcetylation264
KAcetylation164
SPhosphorylation140

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd15585362-406  PHD_ING3
cl22851362-406  PHD_SF superfamily
pfam129982-104  ING
cl152292-104  ING superfamily
cd15505362-406  PHD_ING
cd15587362-408  PHD_Yng1p_like
cd15586362-406  PHD_ING4_5
cd15584362-406  PHD_ING1_2
cd15685362-408  PHD_ING5
cd15682362-406  PHD_ING1
cd15683362-406  PHD_ING2
cd15684362-407  PHD_ING4
pfam00628362-409  PHD
cd15522362-406  PHD_TAF3
smart00249362-406  PHD
cd15568371-404  PHD5_NSD
cd15553362-406  PHD_Cfp1
cd15560362-406  PHD2_3_BPTF
cd16039362-406  PHD_SPP1
cd15661362-404  PHD5_NSD3
cd15489362-406  PHD_SF
cd15552362-406  PHD_PHF3_like
cd15529363-406  PHD2_PHF10
cd15567362-406  PHD4_NSD
cd15531362-406  PHD1_CHD_II
cd15660371-404  PHD5_NSD2
cd15648364-407  PHD1_NSD1_2
cd15532362-406  PHD2_CHD_II
cd15574363-406  PHD_AF10_AF17
cd15659371-404  PHD5_NSD1
cd15606362-406  PHD2_KDM5A
cd15535362-406  PHD1_Rco1
cd15639362-406  PHD_DIDO1_like
cd15518362-406  PHD_Ecm5p_Lid2p_like
cd15554362-406  PHD_PHF2_like
cd15607363-406  PHD2_KDM5B
cd15543363-406  PHD_RSF1
cd15539371-406  PHD1_AIRE
cd15538362-406  PHD_PRKCBP1
cd15517364-406  PHD_TCF19_like
cd15516362-406  PHD2_KDM5A_like
cd15519371-406  PHD1_Lid2p_like
cd15492363-406  PHD_BRPF_JADE_like
cd15573372-406  PHD_JADE
cd15523363-406  PHD_PHF21A
cd15627364-406  PHD_BAZ1A
cd15602358-408  PHD1_KDM5A
COG50344-410  TNG2
TIGR021694-122  SMC_prok_A
pfam1386324-121  DUF4200
COG44773-117  EzrA


Ontology Information


   
HPRD ID13876
Molecular ClassCell cycle control protein
Molecular FunctionATPase activity (GO:0016887); DNA repair protein (GO:0003685)
Biological ProcessDNA repair (GO:0006281)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO